Commit c226b598 authored by sjplimp's avatar sjplimp
Browse files

git-svn-id: svn://svn.icms.temple.edu/lammps-ro/trunk@11398 f3b2605a-c512-4ea7-a41b-209d697bcdaa
parent dcf9c93d
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@@ -68,6 +68,11 @@ a minimization.
<P>Either the <I>quickmin</I> and <I>fire</I> styles are useful in the context of
nudged elastic band (NEB) calculations via the <A HREF = "neb.html">neb</A> command.
</P>
<P>IMPORTANT NOTE: The damped dynamic minimizers use whatever timestep
you have defined via the <A HREF = "timestep.html">timestep</A> command.  Often they
will converge more quickly if you use a timestep about 10x larger than
you would normally use for dynamics simulations.
</P>
<P>IMPORTANT NOTE: The <I>quickmin</I> and <I>fire</I> styles do not yet support
the use of the <A HREF = "fix_box_relax.html">fix box/relax</A> command or
minimizations involving the electron radius in <A HREF = "pair_eff.html">eFF</A>
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@@ -64,6 +64,11 @@ a minimization.
Either the {quickmin} and {fire} styles are useful in the context of
nudged elastic band (NEB) calculations via the "neb"_neb.html command.

IMPORTANT NOTE: The damped dynamic minimizers use whatever timestep
you have defined via the "timestep"_timestep.html command.  Often they
will converge more quickly if you use a timestep about 10x larger than
you would normally use for dynamics simulations.

IMPORTANT NOTE: The {quickmin} and {fire} styles do not yet support
the use of the "fix box/relax"_fix_box_relax.html command or
minimizations involving the electron radius in "eFF"_pair_eff.html
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@@ -63,12 +63,18 @@ Optimization (Procedure 3.1 on p 41).
</P>
<P>The <A HREF = "min_style.html">minimization styles</A> <I>quickmin</I> and <I>fire</I> perform
damped dynamics using an Euler integration step.  Thus they require a
<A HREF = "timestep.html">timestep</A> be defined, typically the same value used for
<A HREF = "run.html">running dynamics</A> with the system, though it may be more
efficient to use a larger timestep.
<A HREF = "timestep.html">timestep</A> be defined.
</P>
<P>The objective function being minimized is the total potential energy
of the system as a function of the N atom coordinates:
<P>IMPORTANT NOTE: The damped dynamic minimizers use whatever timestep
you have defined via the <A HREF = "timestep.html">timestep</A> command.  Often they
will converge more quickly if you use a timestep about 10x larger than
you would normally use for dynamics simulations.
</P>
<HR>

<P>In all cases, the objective function being minimized is the total
potential energy of the system as a function of the N atom
coordinates:
</P>
<CENTER><IMG SRC = "Eqs/min_energy.jpg">
</CENTER>
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@@ -60,12 +60,18 @@ Optimization (Procedure 3.1 on p 41).

The "minimization styles"_min_style.html {quickmin} and {fire} perform
damped dynamics using an Euler integration step.  Thus they require a
"timestep"_timestep.html be defined, typically the same value used for
"running dynamics"_run.html with the system, though it may be more
efficient to use a larger timestep.
"timestep"_timestep.html be defined.

The objective function being minimized is the total potential energy
of the system as a function of the N atom coordinates:
IMPORTANT NOTE: The damped dynamic minimizers use whatever timestep
you have defined via the "timestep"_timestep.html command.  Often they
will converge more quickly if you use a timestep about 10x larger than
you would normally use for dynamics simulations.

:line

In all cases, the objective function being minimized is the total
potential energy of the system as a function of the N atom
coordinates:

:c,image(Eqs/min_energy.jpg)

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@@ -70,12 +70,12 @@ for further discussion.
<P>IMPORTANT NOTE: The current NEB implementation in LAMMPS only allows
there to be one processor per replica.
</P>
<P>IMPORTANT NOTE: As explained below, a NEB calculation perfoms a
damped-dynamics minimization across all the replicas.  This will use
<P>IMPORTANT NOTE: As explained below, a NEB calculation perfoms a damped
dynamics minimization across all the replicas.  The mimimizer uses
whatever timestep you have defined in your input script, via the
<A HREF = "timestep.html">timestep</A> command.  You may get faster convergence for
a NEB calculation if you use a larger timestep than you would normally
use for dynamics with the same system.
<A HREF = "timestep.html">timestep</A> command.  Often NEB will converge more
quickly if you use a timestep about 10x larger than you would normally
use for dynamics simulations.
</P>
<P>When a NEB calculation is performed, it is assumed that each replica
is running the same system, though LAMMPS does not check for this.
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