Loading doc/src/Commands_all.rst +1 −1 Original line number Diff line number Diff line Loading @@ -101,7 +101,7 @@ An alphabetic list of all general LAMMPS commands. * :doc:`region <region>` * :doc:`replicate <replicate>` * :doc:`rerun <rerun>` * :doc:`reset_ids <reset_ids>` * :doc:`reset_atom_ids <reset_atom_ids>` * :doc:`reset_mol_ids <reset_mol_ids>` * :doc:`reset_timestep <reset_timestep>` * :doc:`restart <restart>` Loading doc/src/commands_list.rst +1 −1 Original line number Diff line number Diff line Loading @@ -88,7 +88,7 @@ Commands region replicate rerun reset_ids reset_atom_ids reset_mol_ids reset_timestep restart Loading doc/src/delete_atoms.rst +2 −2 Original line number Diff line number Diff line Loading @@ -89,7 +89,7 @@ number of atoms in the system. Note that this is not done for molecular systems (see the :doc:`atom_style <atom_style>` command), regardless of the *compress* setting, since it would foul up the bond connectivity that has already been assigned. However, the :doc:`reset_ids <reset_ids>` command can be used after this command to :doc:`reset_atom_ids <reset_atom_ids>` command can be used after this command to accomplish the same thing. Note that the re-assignment of IDs is not really a compression, where Loading Loading @@ -157,7 +157,7 @@ using molecule template files via the :doc:`molecule <molecule>` and Related commands """""""""""""""" :doc:`create_atoms <create_atoms>`, :doc:`reset_ids <reset_ids>` :doc:`create_atoms <create_atoms>`, :doc:`reset_atom_ids <reset_atom_ids>` Default """"""" Loading doc/src/reset_ids.rst→doc/src/reset_atom_ids.rst +7 −7 Original line number Diff line number Diff line .. index:: reset_ids .. index:: reset_atom_ids reset_ids command ================= reset_atom_ids command ====================== Syntax """""" .. code-block:: LAMMPS reset_ids keyword values ... reset_atom_ids keyword values ... * zero or more keyword/value pairs may be appended * keyword = *sort* Loading @@ -22,8 +22,8 @@ Examples .. code-block:: LAMMPS reset_ids reset_ids sort yes reset_atom_ids reset_atom_ids sort yes Description """"""""""" Loading Loading @@ -77,7 +77,7 @@ processor have consecutive IDs, as the :doc:`create_atoms that are owned by other processors. The :doc:`comm_modify cutoff <comm_modify>` command can be used to correct this issue. Or you can define a pair style before using this command. If you do the former, you should unset the comm_modify cutoff after using reset_ids so that subsequent communication is not inefficient. reset_atom_ids so that subsequent communication is not inefficient. Restrictions """""""""""" Loading doc/src/reset_mol_ids.rst +1 −1 Original line number Diff line number Diff line Loading @@ -46,7 +46,7 @@ none Related commands """""""""""""""" :doc:`reset_ids <reset_ids>`, :doc:`fix bond/react <fix_bond_react>`, :doc:`reset_atom_ids <reset_atom_ids>`, :doc:`fix bond/react <fix_bond_react>`, :doc:`fix bond/create <fix_bond_create>`, :doc:`fix bond/break <fix_bond_break>`, :doc:`fix evaporate <fix_evaporate>`, Loading Loading
doc/src/Commands_all.rst +1 −1 Original line number Diff line number Diff line Loading @@ -101,7 +101,7 @@ An alphabetic list of all general LAMMPS commands. * :doc:`region <region>` * :doc:`replicate <replicate>` * :doc:`rerun <rerun>` * :doc:`reset_ids <reset_ids>` * :doc:`reset_atom_ids <reset_atom_ids>` * :doc:`reset_mol_ids <reset_mol_ids>` * :doc:`reset_timestep <reset_timestep>` * :doc:`restart <restart>` Loading
doc/src/commands_list.rst +1 −1 Original line number Diff line number Diff line Loading @@ -88,7 +88,7 @@ Commands region replicate rerun reset_ids reset_atom_ids reset_mol_ids reset_timestep restart Loading
doc/src/delete_atoms.rst +2 −2 Original line number Diff line number Diff line Loading @@ -89,7 +89,7 @@ number of atoms in the system. Note that this is not done for molecular systems (see the :doc:`atom_style <atom_style>` command), regardless of the *compress* setting, since it would foul up the bond connectivity that has already been assigned. However, the :doc:`reset_ids <reset_ids>` command can be used after this command to :doc:`reset_atom_ids <reset_atom_ids>` command can be used after this command to accomplish the same thing. Note that the re-assignment of IDs is not really a compression, where Loading Loading @@ -157,7 +157,7 @@ using molecule template files via the :doc:`molecule <molecule>` and Related commands """""""""""""""" :doc:`create_atoms <create_atoms>`, :doc:`reset_ids <reset_ids>` :doc:`create_atoms <create_atoms>`, :doc:`reset_atom_ids <reset_atom_ids>` Default """"""" Loading
doc/src/reset_ids.rst→doc/src/reset_atom_ids.rst +7 −7 Original line number Diff line number Diff line .. index:: reset_ids .. index:: reset_atom_ids reset_ids command ================= reset_atom_ids command ====================== Syntax """""" .. code-block:: LAMMPS reset_ids keyword values ... reset_atom_ids keyword values ... * zero or more keyword/value pairs may be appended * keyword = *sort* Loading @@ -22,8 +22,8 @@ Examples .. code-block:: LAMMPS reset_ids reset_ids sort yes reset_atom_ids reset_atom_ids sort yes Description """"""""""" Loading Loading @@ -77,7 +77,7 @@ processor have consecutive IDs, as the :doc:`create_atoms that are owned by other processors. The :doc:`comm_modify cutoff <comm_modify>` command can be used to correct this issue. Or you can define a pair style before using this command. If you do the former, you should unset the comm_modify cutoff after using reset_ids so that subsequent communication is not inefficient. reset_atom_ids so that subsequent communication is not inefficient. Restrictions """""""""""" Loading
doc/src/reset_mol_ids.rst +1 −1 Original line number Diff line number Diff line Loading @@ -46,7 +46,7 @@ none Related commands """""""""""""""" :doc:`reset_ids <reset_ids>`, :doc:`fix bond/react <fix_bond_react>`, :doc:`reset_atom_ids <reset_atom_ids>`, :doc:`fix bond/react <fix_bond_react>`, :doc:`fix bond/create <fix_bond_create>`, :doc:`fix bond/break <fix_bond_break>`, :doc:`fix evaporate <fix_evaporate>`, Loading
