Commit 8f37285b authored by Abdoreza Ershadinia's avatar Abdoreza Ershadinia Committed by GitHub
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UPLOAD examples

parent ef721455
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+28 −0
Original line number Diff line number Diff line

3 atoms
1 atom types
3 ellipsoids
0 60 xlo xhi
0 60 zlo zhi
0 60 ylo yhi

Atoms
atom-ID atom-type ellipsoidflag density x y z
1 1 1 1 5 30 30
2 1 1 1 30 5 30
3 1 1 1 30 30 5


Ellipsoids
atom-ID shapex shapey shapez quatw quati quatj quatk
1 14 6 8 0.89453 0.44700 0 0 
2 14 6 8 0.25755 0 0.96626 0
3 14 6 8 0.95009 0 0 0.31197


Velocities

1 1.3 0 0 1 0 5
2 0 .2 0 .1 3 0
3 0 0 .9 .5 5 1
+22 −0
Original line number Diff line number Diff line

1 atoms
1 atom types
1 ellipsoids
0 60 xlo xhi
0 60 zlo zhi
0 60 ylo yhi

Atoms
atom-ID atom-type ellipsoidflag density x y z
1 1 1 1 30 30 30


Ellipsoids
atom-ID shapex shapey shapez quatw quati quatj quatk
1 14 6 8 0.44700 0 0.89453  0 


Velocities

1 0 0 1 1 3 5
+25 −0
Original line number Diff line number Diff line

units lj
atom_style ellipsoid
boundary p p f
read_data Data_wall
#------------------------------------#
pair_style resquared 1
pair_coeff 1 1 10.0 1.0 0.5 0.5 4 0.5 0.5 4 1
#------------------------------------#
timestep 0.0001
#------------------------------------#

fix EES_substrate all wall/ees zhi EDGE 10 1 10 zlo EDGE 10 1 10
#^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^#

fix NVT all nve/asphere
#------------------------------------#
compute qw all  property/atom quatw
compute qi all  property/atom quati
compute qj all  property/atom quatj
compute qk all  property/atom quatk
#------------------------------------#
dump 1 all custom 5000 dump1 id type x y z c_qw c_qi c_qj c_qk 
run 2000000
+27 −0
Original line number Diff line number Diff line

units lj
atom_style ellipsoid
boundary p p p
read_data Data_region
#------------------------------------#
region the_wall block 20. 40. 20. 40. 20. 40. side out
#------------------------------------#
pair_style resquared 1
pair_coeff 1 1 10.0 1.0 0.5 0.5 4 0.5 0.5 4 1
#------------------------------------#
timestep 0.0001
#------------------------------------#

fix EES_block all wall/region/ees the_wall 10. 1. 20
#^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^#

fix NVT all nve/asphere
#------------------------------------#
compute qw all  property/atom quatw
compute qi all  property/atom quati
compute qj all  property/atom quatj
compute qk all  property/atom quatk
#------------------------------------#
dump 1 all custom 5000 dump1 id type x y z c_qw c_qi c_qj c_qk 
run 2000000