update log files for ellipse and flow examples (8e07aaf0) · Commits · 郑智淋 / lammps

examples/ellipse/log.5Oct16.ellipse.gayberne.g++.1→examples/ellipse/log.27Nov18.ellipse.gayberne.g++.1

+192 −0

Original line number	Diff line number	Diff line
		LAMMPS (5 Oct 2016)
		LAMMPS (27 Nov 2018)
		using 1 OpenMP thread(s) per MPI task
		# GayBerne ellipsoids in LJ background fluid

		units lj
		@@ -13,6 +14,7 @@ Created orthogonal box = (0 0 -3.53553) to (141.421 141.421 3.53553)
		1 by 1 by 1 MPI processor grid
		create_atoms 1 box
		Created 400 atoms
		Time spent = 0.000507116 secs

		set group all type/fraction 2 0.1 95392
		45 settings made for type/fraction
		@@ -31,8 +33,8 @@ compute rot all temp/asphere
		group spheroid type 1
		355 atoms in group spheroid
		variable dof equal count(spheroid)+2
		compute_modify rot extra ${dof}
		compute_modify rot extra 357
		compute_modify rot extra/dof ${dof}
		compute_modify rot extra/dof 357

		velocity all create 2.4 87287 loop geom

		@@ -61,67 +63,72 @@ compute q all property/atom quatw quati quatj quatk
		fix 1 all npt/asphere temp 2.0 2.0 0.1 iso 0.0 1.0 1.0 mtk no pchain 0 tchain 1
		fix 2 all enforce2d

		compute_modify 1_temp extra ${dof}
		compute_modify 1_temp extra 357
		compute_modify 1_temp extra/dof ${dof}
		compute_modify 1_temp extra/dof 357

		# equilibrate to shrink box around dilute system

		run 2000
		Neighbor list info ...
		1 neighbor list requests
		update every 1 steps, delay 10 steps, check yes
		max neighbors/atom: 2000, page size: 100000
		master list distance cutoff = 4.8
		ghost atom cutoff = 4.8
		binsize = 2.4 -> bins = 59 59 3
		Memory usage per processor = 4.17878 Mbytes
		binsize = 2.4, bins = 59 59 3
		1 neighbor lists, perpetual/occasional/extra = 1 0 0
		(1) pair gayberne, perpetual
		attributes: half, newton on
		pair build: half/bin/atomonly/newton
		stencil: half/bin/2d/newton
		bin: standard
		Per MPI rank memory allocation (min/avg/max) = 4.752 \| 4.752 \| 4.752 Mbytes
		Step c_rot E_pair TotEng Press Volume
		0 2.2718861 0 2.394 0.04788 20000
		100 1.7443002 0 1.8380563 0.03576216 20558.672
		200 2.2770454 0 2.3994366 0.046545139 20620.298
		300 1.8573283 0 1.9571597 0.04240689 18460.771
		400 2.1709732 -0.00046172705 2.2872012 0.066791266 13689.473
		500 1.9712384 -0.014365021 2.0484832 0.12263116 8475.3548
		600 2.0811163 -0.21654179 1.8340664 0.22433913 4685.3955
		700 2.1578657 -0.68696192 1.3974517 0.60188995 2533.8873
		800 1.8843124 -1.6343111 0.2143696 1.105687 1440.5961
		900 2.1968489 -3.0749104 -0.92393949 3.2168763 924.62895
		1000 1.4196808 -4.3944118 -2.972349 3.1895485 744.95136
		1100 1.9354395 -4.9265904 -2.9959864 1.5434922 715.87574
		1200 2.1063417 -4.5664569 -2.4467911 1.2012289 760.07454
		1300 1.859493 -4.1043918 -2.2530918 0.35847277 846.54577
		1400 2.1430322 -3.7414541 -1.6163368 0.7461639 928.96639
		1500 1.9056885 -3.5118131 -1.5910333 0.35347839 1021.0387
		1600 2.1297675 -3.2577617 -1.119554 0.73265236 1087.6271
		1700 1.9341135 -3.2121534 -1.2832848 0.46406018 1140.8473
		1800 2.0861201 -3.2382735 -1.1460071 0.6058924 1161.1051
		1900 1.9976529 -3.2494581 -1.2698889 0.69257341 1151.4372
		2000 1.9791754 -3.3850065 -1.3653244 0.88473341 1121.7026
		Loop time of 1.01022 on 1 procs for 2000 steps with 400 atoms

		Performance: 342102.068 tau/day, 1979.757 timesteps/s
		99.8% CPU use with 1 MPI tasks x no OpenMP threads
		100 1.7443419 0 1.8381003 0.035765442 20557.278
		200 2.2768798 0 2.3992621 0.046544845 20618.928
		300 1.8573086 0 1.9571389 0.04239709 18464.842
		400 2.1707875 -0.00045989278 2.2870073 0.066725499 13701.839
		500 1.9710982 -0.014545321 2.0486111 0.12205188 8490.5214
		600 2.0818888 -0.21572832 1.8356955 0.22333255 4697.3035
		700 2.1551458 -0.68175426 1.4003368 0.60385996 2541.157
		800 1.8879651 -1.6357045 0.21794544 1.0826917 1444.4484
		900 2.1993533 -3.0664068 -0.91036919 3.2142529 925.96691
		1000 1.4285977 -4.3962037 -2.9651113 3.1830461 744.91324
		1100 1.933074 -4.9398703 -3.0147256 1.4694937 715.30906
		1200 2.0872875 -4.5711608 -2.4689861 1.4091154 757.68606
		1300 1.8950043 -4.1568789 -2.2487345 0.19138859 846.69407
		1400 2.1773467 -3.7905723 -1.6164698 0.55639059 930.77026
		1500 1.934954 -3.5505876 -1.6187812 0.2572587 1020.2803
		1600 2.083004 -3.2707357 -1.1794873 0.68661802 1088.5587
		1700 1.9434093 -3.2434441 -1.3043926 0.72465776 1136.9866
		1800 1.9731416 -3.2692426 -1.3364608 0.52887378 1162.1022
		1900 2.0618126 -3.2264372 -1.162807 0.93455596 1155.8306
		2000 1.894614 -3.3964158 -1.4932323 0.69021871 1125.7713
		Loop time of 0.950695 on 1 procs for 2000 steps with 400 atoms

		Performance: 363523.513 tau/day, 2103.724 timesteps/s
		99.8% CPU use with 1 MPI tasks x 1 OpenMP threads

		MPI task timing breakdown:
		Section \| min time \| avg time \| max time \|%varavg\| %total
		---------------------------------------------------------------
		Pair \| 0.80465 \| 0.80465 \| 0.80465 \| 0.0 \| 79.65
		Neigh \| 0.014326 \| 0.014326 \| 0.014326 \| 0.0 \| 1.42
		Comm \| 0.011179 \| 0.011179 \| 0.011179 \| 0.0 \| 1.11
		Output \| 0.00032926 \| 0.00032926 \| 0.00032926 \| 0.0 \| 0.03
		Modify \| 0.17561 \| 0.17561 \| 0.17561 \| 0.0 \| 17.38
		Other \| \| 0.004126 \| \| \| 0.41
		Pair \| 0.72638 \| 0.72638 \| 0.72638 \| 0.0 \| 76.40
		Neigh \| 0.015026 \| 0.015026 \| 0.015026 \| 0.0 \| 1.58
		Comm \| 0.015169 \| 0.015169 \| 0.015169 \| 0.0 \| 1.60
		Output \| 0.0004487 \| 0.0004487 \| 0.0004487 \| 0.0 \| 0.05
		Modify \| 0.18921 \| 0.18921 \| 0.18921 \| 0.0 \| 19.90
		Other \| \| 0.004463 \| \| \| 0.47

		Nlocal: 400 ave 400 max 400 min
		Histogram: 1 0 0 0 0 0 0 0 0 0
		Nghost: 249 ave 249 max 249 min
		Nghost: 247 ave 247 max 247 min
		Histogram: 1 0 0 0 0 0 0 0 0 0
		Neighs: 3031 ave 3031 max 3031 min
		Neighs: 3021 ave 3021 max 3021 min
		Histogram: 1 0 0 0 0 0 0 0 0 0

		Total # of neighbors = 3031
		Ave neighs/atom = 7.5775
		Neighbor list builds = 140
		Total # of neighbors = 3021
		Ave neighs/atom = 7.5525
		Neighbor list builds = 137
		Dangerous builds = 80

		# run dynamics on dense system
		@@ -130,54 +137,54 @@ unfix 1
		fix 1 all nve/asphere

		run 2000
		Memory usage per processor = 4.18892 Mbytes
		Per MPI rank memory allocation (min/avg/max) = 4.763 \| 4.763 \| 4.763 Mbytes
		Step c_rot E_pair TotEng Press Volume
		2000 1.9791754 -3.3850065 -1.3653244 0.88473341 1121.7026
		2100 2.0067383 -3.4164295 -1.402453 0.63163512 1121.7026
		2200 2.0298976 -3.4415998 -1.4231421 0.91861985 1121.7026
		2300 2.0418707 -3.4552616 -1.4277716 0.58834236 1121.7026
		2400 2.0126621 -3.424202 -1.3839096 0.80723942 1121.7026
		2500 1.9403964 -3.3489489 -1.3995215 0.79492719 1121.7026
		2600 2.0459304 -3.4600931 -1.4229608 0.69699402 1121.7026
		2700 2.0032293 -3.4126492 -1.429784 0.44210814 1121.7026
		2800 1.9367905 -3.345688 -1.4171068 0.6872734 1121.7026
		2900 1.9870908 -3.3983385 -1.4218501 0.42402247 1121.7026
		3000 1.9654849 -3.3767671 -1.3835149 0.6611643 1121.7026
		3100 1.9308462 -3.3343018 -1.3895992 0.45213534 1121.7026
		3200 1.8924656 -3.2956948 -1.4157919 0.56524685 1121.7026
		3300 1.8802888 -3.2822198 -1.4071878 0.86030365 1121.7026
		3400 1.8847013 -3.2852796 -1.4162404 0.91660541 1121.7026
		3500 1.9290452 -3.3332356 -1.3889879 0.70770119 1121.7026
		3600 1.9223314 -3.32413 -1.3896278 0.56763748 1121.7026
		3700 1.9185132 -3.3197222 -1.3913701 0.66889312 1121.7026
		3800 1.877321 -3.2796045 -1.4050964 0.67335591 1121.7026
		3900 1.9250447 -3.3313033 -1.3872185 0.64573122 1121.7026
		4000 1.8574113 -3.2592142 -1.3807543 0.46117918 1121.7026
		Loop time of 1.13656 on 1 procs for 2000 steps with 400 atoms

		Performance: 304074.636 tau/day, 1759.691 timesteps/s
		99.9% CPU use with 1 MPI tasks x no OpenMP threads
		2000 1.894614 -3.3964158 -1.4932323 0.69021871 1125.7713
		2100 1.8880098 -3.3875135 -1.4857102 0.21017294 1125.7713
		2200 1.9098636 -3.4103342 -1.5286928 0.58806422 1125.7713
		2300 1.9069018 -3.4099451 -1.6100279 0.63472569 1125.7713
		2400 1.9773111 -3.4856999 -1.5268537 0.68904663 1125.7713
		2500 2.0027582 -3.5144592 -1.4900208 0.59925433 1125.7713
		2600 1.9616623 -3.4744355 -1.5230915 0.26873349 1125.7713
		2700 1.8601168 -3.3625754 -1.4872109 0.68399005 1125.7713
		2800 1.8194253 -3.319084 -1.5148077 0.62537226 1125.7713
		2900 1.8465082 -3.3451652 -1.5508026 0.60163613 1125.7713
		3000 1.8894551 -3.3918005 -1.5180435 0.61243969 1125.7713
		3100 1.866554 -3.3662479 -1.5275331 0.54334005 1125.7713
		3200 1.8233715 -3.3204693 -1.5180055 0.82717864 1125.7713
		3300 1.7945158 -3.2898507 -1.4976351 0.56745564 1125.7713
		3400 1.8242025 -3.3242538 -1.5070312 1.0550995 1125.7713
		3500 1.860405 -3.3595757 -1.5138968 0.56959347 1125.7713
		3600 1.76951 -3.2635375 -1.5302852 0.47091998 1125.7713
		3700 1.7874111 -3.2838743 -1.4858244 0.74507678 1125.7713
		3800 1.8084002 -3.3081089 -1.5294313 0.63717641 1125.7713
		3900 1.9201118 -3.4261733 -1.4874713 0.4111663 1125.7713
		4000 1.9130445 -3.4170846 -1.49357 0.35783848 1125.7713
		Loop time of 1.05944 on 1 procs for 2000 steps with 400 atoms

		Performance: 326208.857 tau/day, 1887.783 timesteps/s
		99.8% CPU use with 1 MPI tasks x 1 OpenMP threads

		MPI task timing breakdown:
		Section \| min time \| avg time \| max time \|%varavg\| %total
		---------------------------------------------------------------
		Pair \| 1.0076 \| 1.0076 \| 1.0076 \| 0.0 \| 88.65
		Neigh \| 0.0065663 \| 0.0065663 \| 0.0065663 \| 0.0 \| 0.58
		Comm \| 0.011639 \| 0.011639 \| 0.011639 \| 0.0 \| 1.02
		Output \| 0.00035858 \| 0.00035858 \| 0.00035858 \| 0.0 \| 0.03
		Modify \| 0.10463 \| 0.10463 \| 0.10463 \| 0.0 \| 9.21
		Other \| \| 0.00581 \| \| \| 0.51
		Pair \| 0.91753 \| 0.91753 \| 0.91753 \| 0.0 \| 86.60
		Neigh \| 0.0072479 \| 0.0072479 \| 0.0072479 \| 0.0 \| 0.68
		Comm \| 0.016155 \| 0.016155 \| 0.016155 \| 0.0 \| 1.52
		Output \| 0.00042105 \| 0.00042105 \| 0.00042105 \| 0.0 \| 0.04
		Modify \| 0.11222 \| 0.11222 \| 0.11222 \| 0.0 \| 10.59
		Other \| \| 0.005868 \| \| \| 0.55

		Nlocal: 400 ave 400 max 400 min
		Histogram: 1 0 0 0 0 0 0 0 0 0
		Nghost: 219 ave 219 max 219 min
		Nghost: 243 ave 243 max 243 min
		Histogram: 1 0 0 0 0 0 0 0 0 0
		Neighs: 3046 ave 3046 max 3046 min
		Neighs: 3073 ave 3073 max 3073 min
		Histogram: 1 0 0 0 0 0 0 0 0 0

		Total # of neighbors = 3046
		Ave neighs/atom = 7.615
		Neighbor list builds = 47
		Total # of neighbors = 3073
		Ave neighs/atom = 7.6825
		Neighbor list builds = 46
		Dangerous builds = 0

		Please see the log.cite file for references relevant to this simulation

examples/ellipse/log.5Oct16.ellipse.gayberne.g++.4→examples/ellipse/log.27Nov18.ellipse.gayberne.g++.4

+192 −0

Original line number	Diff line number	Diff line
		LAMMPS (5 Oct 2016)
		LAMMPS (27 Nov 2018)
		using 1 OpenMP thread(s) per MPI task
		# GayBerne ellipsoids in LJ background fluid

		units lj
		@@ -13,6 +14,7 @@ Created orthogonal box = (0 0 -3.53553) to (141.421 141.421 3.53553)
		2 by 2 by 1 MPI processor grid
		create_atoms 1 box
		Created 400 atoms
		Time spent = 0.000466347 secs

		set group all type/fraction 2 0.1 95392
		45 settings made for type/fraction
		@@ -31,8 +33,8 @@ compute rot all temp/asphere
		group spheroid type 1
		355 atoms in group spheroid
		variable dof equal count(spheroid)+2
		compute_modify rot extra ${dof}
		compute_modify rot extra 357
		compute_modify rot extra/dof ${dof}
		compute_modify rot extra/dof 357

		velocity all create 2.4 87287 loop geom

		@@ -61,67 +63,72 @@ compute q all property/atom quatw quati quatj quatk
		fix 1 all npt/asphere temp 2.0 2.0 0.1 iso 0.0 1.0 1.0 mtk no pchain 0 tchain 1
		fix 2 all enforce2d

		compute_modify 1_temp extra ${dof}
		compute_modify 1_temp extra 357
		compute_modify 1_temp extra/dof ${dof}
		compute_modify 1_temp extra/dof 357

		# equilibrate to shrink box around dilute system

		run 2000
		Neighbor list info ...
		1 neighbor list requests
		update every 1 steps, delay 10 steps, check yes
		max neighbors/atom: 2000, page size: 100000
		master list distance cutoff = 4.8
		ghost atom cutoff = 4.8
		binsize = 2.4 -> bins = 59 59 3
		Memory usage per processor = 4.16784 Mbytes
		binsize = 2.4, bins = 59 59 3
		1 neighbor lists, perpetual/occasional/extra = 1 0 0
		(1) pair gayberne, perpetual
		attributes: half, newton on
		pair build: half/bin/atomonly/newton
		stencil: half/bin/2d/newton
		bin: standard
		Per MPI rank memory allocation (min/avg/max) = 4.738 \| 4.738 \| 4.738 Mbytes
		Step c_rot E_pair TotEng Press Volume
		0 2.2718861 0 2.394 0.04788 20000
		100 1.7443002 0 1.8380563 0.03576216 20558.672
		200 2.2770454 0 2.3994366 0.046545139 20620.298
		300 1.8573283 0 1.9571597 0.04240689 18460.771
		400 2.1709732 -0.00046172705 2.2872012 0.066791266 13689.473
		500 1.9712384 -0.014365021 2.0484832 0.12263116 8475.3548
		600 2.0811163 -0.21654179 1.8340664 0.22433913 4685.3955
		700 2.1578657 -0.68696192 1.3974517 0.60188995 2533.8873
		800 1.8843124 -1.6343111 0.2143696 1.105687 1440.5961
		900 2.1968489 -3.0749104 -0.92393949 3.2168763 924.62895
		1000 1.4196808 -4.3944118 -2.972349 3.1895485 744.95136
		1100 1.9354395 -4.9265904 -2.9959864 1.5434922 715.87574
		1200 2.1063417 -4.5664569 -2.4467911 1.2012289 760.07454
		1300 1.859493 -4.1043918 -2.2530918 0.35847277 846.54577
		1400 2.1430322 -3.7414541 -1.6163368 0.7461639 928.96639
		1500 1.9056885 -3.5118131 -1.5910333 0.35347839 1021.0387
		1600 2.1297675 -3.2577617 -1.119554 0.73265236 1087.6271
		1700 1.9341135 -3.2121534 -1.2832848 0.46406018 1140.8473
		1800 2.0861201 -3.2382735 -1.1460071 0.6058924 1161.1051
		1900 1.9976529 -3.2494581 -1.2698889 0.69257341 1151.4372
		2000 1.9791754 -3.3850065 -1.3653244 0.88473343 1121.7026
		Loop time of 0.348825 on 4 procs for 2000 steps with 400 atoms

		Performance: 990754.062 tau/day, 5733.530 timesteps/s
		99.5% CPU use with 4 MPI tasks x no OpenMP threads
		100 1.7443419 0 1.8381003 0.035765442 20557.278
		200 2.2768798 0 2.3992621 0.046544845 20618.928
		300 1.8573086 0 1.9571389 0.04239709 18464.842
		400 2.1707875 -0.00045989278 2.2870073 0.066725499 13701.839
		500 1.9710982 -0.014545321 2.0486111 0.12205188 8490.5214
		600 2.0818888 -0.21572832 1.8356955 0.22333255 4697.3035
		700 2.1551458 -0.68175426 1.4003368 0.60385996 2541.157
		800 1.8879651 -1.6357045 0.21794544 1.0826917 1444.4484
		900 2.1993533 -3.0664068 -0.91036919 3.2142529 925.96691
		1000 1.4285977 -4.3962037 -2.9651113 3.1830461 744.91324
		1100 1.933074 -4.9398703 -3.0147256 1.4694937 715.30906
		1200 2.0872875 -4.5711608 -2.4689861 1.4091154 757.68606
		1300 1.8950043 -4.1568789 -2.2487345 0.19138859 846.69407
		1400 2.1773467 -3.7905723 -1.6164698 0.55639059 930.77026
		1500 1.934954 -3.5505876 -1.6187812 0.2572587 1020.2803
		1600 2.083004 -3.2707357 -1.1794873 0.68661802 1088.5587
		1700 1.9434093 -3.2434441 -1.3043926 0.72465775 1136.9866
		1800 1.9731416 -3.2692426 -1.3364608 0.52887379 1162.1022
		1900 2.0618126 -3.2264372 -1.162807 0.93455596 1155.8306
		2000 1.894614 -3.3964158 -1.4932323 0.69021875 1125.7713
		Loop time of 0.349687 on 4 procs for 2000 steps with 400 atoms

		Performance: 988313.640 tau/day, 5719.408 timesteps/s
		95.9% CPU use with 4 MPI tasks x 1 OpenMP threads

		MPI task timing breakdown:
		Section \| min time \| avg time \| max time \|%varavg\| %total
		---------------------------------------------------------------
		Pair \| 0.18317 \| 0.20567 \| 0.22597 \| 3.3 \| 58.96
		Neigh \| 0.0036285 \| 0.0038322 \| 0.0039773 \| 0.2 \| 1.10
		Comm \| 0.043543 \| 0.06339 \| 0.085499 \| 5.9 \| 18.17
		Output \| 0.00044894 \| 0.00046825 \| 0.00051665 \| 0.1 \| 0.13
		Modify \| 0.069605 \| 0.070677 \| 0.071795 \| 0.3 \| 20.26
		Other \| \| 0.004791 \| \| \| 1.37

		Nlocal: 100 ave 113 max 85 min
		Histogram: 1 0 0 1 0 0 0 1 0 1
		Nghost: 149.75 ave 160 max 141 min
		Histogram: 1 1 0 0 0 0 1 0 0 1
		Neighs: 757.75 ave 885 max 592 min
		Pair \| 0.17051 \| 0.19038 \| 0.20513 \| 3.1 \| 54.44
		Neigh \| 0.0039656 \| 0.0043136 \| 0.0049045 \| 0.6 \| 1.23
		Comm \| 0.054327 \| 0.071206 \| 0.087044 \| 4.9 \| 20.36
		Output \| 0.00043106 \| 0.00062788 \| 0.0012097 \| 0.0 \| 0.18
		Modify \| 0.072846 \| 0.077488 \| 0.081302 \| 1.2 \| 22.16
		Other \| \| 0.005673 \| \| \| 1.62

		Nlocal: 100 ave 112 max 84 min
		Histogram: 1 0 0 1 0 0 0 0 1 1

		Total # of neighbors = 3031
		Ave neighs/atom = 7.5775
		Neighbor list builds = 140
		Nghost: 146.75 ave 156 max 137 min
		Histogram: 2 0 0 0 0 0 0 0 0 2
		Neighs: 755.25 ave 889 max 589 min
		Histogram: 1 0 1 0 0 0 0 0 0 2

		Total # of neighbors = 3021
		Ave neighs/atom = 7.5525
		Neighbor list builds = 137
		Dangerous builds = 80

		# run dynamics on dense system
		@@ -130,54 +137,54 @@ unfix 1
		fix 1 all nve/asphere

		run 2000
		Memory usage per processor = 4.16867 Mbytes
		Per MPI rank memory allocation (min/avg/max) = 4.74 \| 4.74 \| 4.74 Mbytes
		Step c_rot E_pair TotEng Press Volume
		2000 1.9791754 -3.3850065 -1.3653244 0.88473343 1121.7026
		2100 2.0067383 -3.4164295 -1.402453 0.63163513 1121.7026
		2200 2.0298976 -3.4415998 -1.4231421 0.91861985 1121.7026
		2300 2.0418708 -3.4552617 -1.4277716 0.58834191 1121.7026
		2400 2.0126625 -3.4242024 -1.3839097 0.80723766 1121.7026
		2500 1.9403968 -3.3489494 -1.3995212 0.79492647 1121.7026
		2600 2.0459318 -3.4600945 -1.4229599 0.69698729 1121.7026
		2700 2.0032338 -3.4126541 -1.4297892 0.44208354 1121.7026
		2800 1.9367789 -3.3456765 -1.4171038 0.6873665 1121.7026
		2900 1.9870979 -3.3983434 -1.4218523 0.42398659 1121.7026
		3000 1.965491 -3.376773 -1.3835208 0.66112051 1121.7026
		3100 1.9307633 -3.3342121 -1.3895745 0.45224657 1121.7026
		3200 1.8918453 -3.2949278 -1.4157216 0.56825582 1121.7026
		3300 1.8824584 -3.2844031 -1.4066487 0.85795659 1121.7026
		3400 1.8871451 -3.2878452 -1.4156691 0.91410213 1121.7026
		3500 1.9297625 -3.3340904 -1.3901995 0.6754809 1121.7026
		3600 1.8994197 -3.3009141 -1.3964162 0.58676937 1121.7026
		3700 1.9181765 -3.3204193 -1.3956433 0.54632736 1121.7026
		3800 1.9278078 -3.3300748 -1.3999307 0.48904879 1121.7026
		3900 1.888321 -3.2896024 -1.3848249 0.49521159 1121.7026
		4000 1.8372182 -3.2347372 -1.4091759 0.61895915 1121.7026
		Loop time of 0.380732 on 4 procs for 2000 steps with 400 atoms

		Performance: 907726.114 tau/day, 5253.045 timesteps/s
		98.7% CPU use with 4 MPI tasks x no OpenMP threads
		2000 1.894614 -3.3964158 -1.4932323 0.69021875 1125.7713
		2100 1.8880098 -3.3875135 -1.4857102 0.21017294 1125.7713
		2200 1.9098636 -3.4103342 -1.5286928 0.58806421 1125.7713
		2300 1.9069019 -3.4099452 -1.610028 0.63472573 1125.7713
		2400 1.9773106 -3.4856993 -1.5268537 0.68904883 1125.7713
		2500 2.0027578 -3.5144588 -1.4900205 0.59925475 1125.7713
		2600 1.9616631 -3.4744364 -1.5230915 0.26873516 1125.7713
		2700 1.8601136 -3.362572 -1.487211 0.68399725 1125.7713
		2800 1.8194391 -3.3190986 -1.5148092 0.62533318 1125.7713
		2900 1.846505 -3.3451617 -1.5508267 0.60156074 1125.7713
		3000 1.8894747 -3.3918215 -1.5180241 0.61210219 1125.7713
		3100 1.866832 -3.3665537 -1.5276291 0.54222093 1125.7713
		3200 1.8233362 -3.320323 -1.5177672 0.82891257 1125.7713
		3300 1.7946952 -3.2899252 -1.4974666 0.56782835 1125.7713
		3400 1.8283468 -3.3286169 -1.5065958 1.0370934 1125.7713
		3500 1.8538134 -3.3526037 -1.5116661 0.58945341 1125.7713
		3600 1.7851382 -3.2811082 -1.5306837 0.462114 1125.7713
		3700 1.7664573 -3.2622701 -1.4774432 0.86540402 1125.7713
		3800 1.8574677 -3.3592552 -1.5196884 0.45146881 1125.7713
		3900 1.9139087 -3.4196718 -1.5054647 0.79636137 1125.7713
		4000 1.9081675 -3.4146407 -1.5285325 0.69377107 1125.7713
		Loop time of 0.379139 on 4 procs for 2000 steps with 400 atoms

		Performance: 911539.742 tau/day, 5275.114 timesteps/s
		96.6% CPU use with 4 MPI tasks x 1 OpenMP threads

		MPI task timing breakdown:
		Section \| min time \| avg time \| max time \|%varavg\| %total
		---------------------------------------------------------------
		Pair \| 0.24119 \| 0.25802 \| 0.28318 \| 3.0 \| 67.77
		Neigh \| 0.001538 \| 0.0017161 \| 0.0018811 \| 0.3 \| 0.45
		Comm \| 0.055332 \| 0.081399 \| 0.098741 \| 5.6 \| 21.38
		Output \| 0.0005157 \| 0.00053984 \| 0.00058794 \| 0.1 \| 0.14
		Modify \| 0.026189 \| 0.027282 \| 0.029091 \| 0.7 \| 7.17
		Other \| \| 0.01177 \| \| \| 3.09

		Nlocal: 100 ave 106 max 92 min
		Histogram: 1 0 0 0 0 1 0 1 0 1
		Nghost: 148 ave 152 max 145 min
		Histogram: 1 1 0 0 0 1 0 0 0 1
		Neighs: 760.25 ave 815 max 713 min
		Histogram: 1 1 0 0 0 0 1 0 0 1

		Total # of neighbors = 3041
		Ave neighs/atom = 7.6025
		Neighbor list builds = 46
		Pair \| 0.20177 \| 0.23758 \| 0.28816 \| 7.4 \| 62.66
		Neigh \| 0.0015984 \| 0.001946 \| 0.0022459 \| 0.6 \| 0.51
		Comm \| 0.046169 \| 0.093409 \| 0.13456 \| 11.9 \| 24.64
		Output \| 0.00048614 \| 0.00087821 \| 0.0016096 \| 0.0 \| 0.23
		Modify \| 0.02563 \| 0.029633 \| 0.034698 \| 2.0 \| 7.82
		Other \| \| 0.01569 \| \| \| 4.14

		Nlocal: 100 ave 117 max 87 min
		Histogram: 1 0 1 0 1 0 0 0 0 1
		Nghost: 152.5 ave 169 max 131 min
		Histogram: 1 0 0 0 1 0 0 0 1 1
		Neighs: 771.25 ave 988 max 612 min
		Histogram: 1 0 1 0 1 0 0 0 0 1

		Total # of neighbors = 3085
		Ave neighs/atom = 7.7125
		Neighbor list builds = 45
		Dangerous builds = 0

		Please see the log.cite file for references relevant to this simulation

examples/ellipse/log.5Oct16.ellipse.resquared.g++.1→examples/ellipse/log.27Nov18.ellipse.resquared.g++.1

+189 −0

File changed and moved.

Preview size limit exceeded, changes collapsed.

examples/ellipse/log.5Oct16.ellipse.resquared.g++.4→examples/ellipse/log.27Nov18.ellipse.resquared.g++.4

+189 −0

File changed and moved.

Preview size limit exceeded, changes collapsed.

examples/flow/log.5Oct16.flow.couette.g++.1→examples/flow/log.27Nov18.flow.couette.g++.1

+21 −14

File changed and moved.

Preview size limit exceeded, changes collapsed.

Admin message