Update DOI resolver (8af9d403) · Commits · 郑智淋 / lammps

cmake/README.md

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		@@ -1383,8 +1383,8 @@ cmake -C ../cmake/presets/all_on.cmake -C ../cmake/presets/nolib.cmake -D PKG_GP
		Some potentials that are also implemented in the Yet Another Force Field (YAFF) code.
		The expressions and their use are discussed in the following papers:
		<ul>
		<li><a href="http://dx.doi.org/10.1002/jcc.23877" target="_blank">Vanduyfhuys et al., J. Comput. Chem., 36 (13), 1015-1027 (2015)</a></li>
		<li><a href="http://dx.doi.org/10.1002/jcc.25173" target="_blank">Vanduyfhuys et al., J. Comput. Chem., 39 (16), 999-1011 (2018)</a></li>
		<li><a href="https://doi.org/10.1002/jcc.23877" target="_blank">Vanduyfhuys et al., J. Comput. Chem., 36 (13), 1015-1027 (2015)</a></li>
		<li><a href="https://doi.org/10.1002/jcc.25173" target="_blank">Vanduyfhuys et al., J. Comput. Chem., 39 (16), 999-1011 (2018)</a></li>
		</ul>
		</td>
		<td>

doc/src/Howto_tip4p.rst

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		@@ -41,7 +41,7 @@ coefficients.
		\|

		For the TIP4/Ice model (J Chem Phys, 122, 234511 (2005);
		http://dx.doi.org/10.1063/1.1931662) these values can be used:
		https://doi.org/10.1063/1.1931662) these values can be used:

		\| O mass = 15.9994
		\| H mass = 1.008
		@@ -57,7 +57,7 @@ http://dx.doi.org/10.1063/1.1931662) these values can be used:
		\|

		For the TIP4P/2005 model (J Chem Phys, 123, 234505 (2005);
		http://dx.doi.org/10.1063/1.2121687), these values can be used:
		https://doi.org/10.1063/1.2121687), these values can be used:

		\| O mass = 15.9994
		\| H mass = 1.008

doc/src/Packages_details.rst

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		@@ -2515,8 +2515,8 @@ The expressions and their use are discussed in the following papers

		which discuss the `QuickFF <quickff_>`_ methodology.

		.. _vanduyfhuys2015: http://dx.doi.org/10.1002/jcc.23877
		.. _vanduyfhuys2018: http://dx.doi.org/10.1002/jcc.25173
		.. _vanduyfhuys2015: https://doi.org/10.1002/jcc.23877
		.. _vanduyfhuys2018: https://doi.org/10.1002/jcc.25173
		.. _quickff: http://molmod.github.io/QuickFF
		.. _yaff: https://github.com/molmod/yaff

doc/src/fix_orient.rst

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		@@ -205,7 +205,7 @@ Science, 117, 397-405 (2016).


		(Wicaksono2) Wicaksono, figshare,
		https://dx.doi.org/10.6084/m9.figshare.1488628.v1 (2015).
		https://doi.org/10.6084/m9.figshare.1488628.v1 (2015).


		----------

doc/src/fix_phonon.rst

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		@@ -218,7 +218,7 @@ the :doc:`dimension <dimension>` command, and nasr = 20.

		(Campana) C. Campana and
		M. H. Muser, *Practical Green's function approach to the
		simulation of elastic semi-infinite solids*\ , `Phys. Rev. B [74], 075420 (2006) <http://dx.doi.org/10.1103/PhysRevB.74.075420>`_
		simulation of elastic semi-infinite solids*\ , `Phys. Rev. B [74], 075420 (2006) <https://doi.org/10.1103/PhysRevB.74.075420>`_

		.. _Kong:

		@@ -226,15 +226,15 @@ simulation of elastic semi-infinite solids*\ , `Phys. Rev. B [74], 075420 (2006)

		(Kong) L.T. Kong, G. Bartels, C. Campana,
		C. Denniston, and Martin H. Muser, *Implementation of Green's
		function molecular dynamics: An extension to LAMMPS*\ , `Computer Physics Communications [180](6):1004-1010 (2009). <http://dx.doi.org/10.1016/j.cpc.2008.12.035>`_
		function molecular dynamics: An extension to LAMMPS*\ , `Computer Physics Communications [180](6):1004-1010 (2009). <https://doi.org/10.1016/j.cpc.2008.12.035>`_

		L.T. Kong, C. Denniston, and Martin H. Muser,
		*An improved version of the Green's function molecular dynamics
		method*\ , `Computer Physics Communications [182](2):540-541 (2011). <http://dx.doi.org/10.1016/j.cpc.2010.10.006>`_
		method*\ , `Computer Physics Communications [182](2):540-541 (2011). <https://doi.org/10.1016/j.cpc.2010.10.006>`_

		.. _Kong2011:



		(Kong2011) L.T. Kong, *Phonon dispersion measured directly from
		molecular dynamics simulations*\ , `Computer Physics Communications [182](10):2201-2207, (2011). <http://dx.doi.org/10.1016/j.cpc.2011.04.019>`_
		molecular dynamics simulations*\ , `Computer Physics Communications [182](10):2201-2207, (2011). <https://doi.org/10.1016/j.cpc.2011.04.019>`_

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