modified "package" related pages to point to USER-CAUCHY correctly (7b64ed19) · Commits · 郑智淋 / lammps

doc/src/Packages_details.txt

+49 −30

Original line number	Diff line number	Diff line
		@@ -68,6 +68,7 @@ as contained in the file name.
		"USER-ATC"_#PKG-USER-ATC,
		"USER-AWPMD"_#PKG-USER-AWPMD,
		"USER-BOCS"_#PKG-USER-BOCS,
		"USER-CAUCHY"_#PKG-USER-CAUCHY,
		"USER-CGDNA"_#PKG-USER-CGDNA,
		"USER-CGSDK"_#PKG-USER-CGSDK,
		"USER-COLVARS"_#PKG-USER-COLVARS,
		@@ -1120,6 +1121,26 @@ Example inputs are in the examples/USER/bocs folder.

		:line

		USER-CAUCHY package :link(PKG-USER-CAUCHY),h4

		[Contents:]

		This package provides a modified version of
		"fix npt"_fix_nh.html which directly controls the Cauchy (true) stress
		instead of the second Piola-Kirchhoff stress, as presented in:

		R. E. Miller, E. B. Tadmor, J. S. Gibson, N. Bernstein, and F. Pavia,
		“Molecular Dynamics at Constant Cauchy Stress,” J. Chem. Phys. 144, 184107 (2016).

		[Authors:] R. E. Miller (Carleton University), F. Pavia and S. Pattamatta

		[Supporting info:]

		Example input is in the examples/USER/cauchy folder. Usage instructions are part of
		the "fix npt"_fix_nh.html description.

		:line

		USER-CGDNA package :link(PKG-USER-CGDNA),h4

		[Contents:]
		@@ -2074,5 +2095,3 @@ src/USER-VTK: filenames -> commands
		src/USER-VTK/README
		lib/vtk/README
		"dump vtk"_dump_vtk.html :ul

+1 −0

Original line number	Diff line number	Diff line
		@@ -41,6 +41,7 @@ Package, Description, Doc page, Example, Library
		"USER-ATC"_Packages_details.html#PKG-USER-ATC, atom-to-continuum coupling, "fix atc"_fix_atc.html, USER/atc, int
		"USER-AWPMD"_Packages_details.html#PKG-USER-AWPMD, wave-packet MD, "pair_style awpmd/cut"_pair_awpmd.html, USER/awpmd, int
		"USER-BOCS"_Packages_details.html#PKG-USER-BOCS, BOCS bottom up coarse graining, "fix bocs"_fix_bocs.html, USER/bocs, no
		"USER-CAUCHY"_Packages_details.html#PKG-USER-CAUCHY, Cauchystat stress control, "fix npt/cauchy"_fix_nh.html, USER/cauchy, int
		"USER-CGDNA"_Packages_details.html#PKG-USER-CGDNA, coarse-grained DNA force fields, src/USER-CGDNA/README, USER/cgdna, no
		"USER-CGSDK"_Packages_details.html#PKG-USER-CGSDK, SDK coarse-graining model, "pair_style lj/sdk"_pair_sdk.html, USER/cgsdk, no
		"USER-COLVARS"_Packages_details.html#PKG-USER-COLVARS, collective variables library, "fix colvars"_fix_colvars.html, USER/colvars, int