Unverified Commit 60f6c3f3 authored by Axel Kohlmeyer's avatar Axel Kohlmeyer Committed by GitHub
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Merge pull request #1428 from sstrong99/e3b

add E3B water model to USER-MISC package
parents c911a442 805cc18b
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@@ -80,6 +80,7 @@ OPT.
"dpd/fdt/energy (k)"_pair_dpd_fdt.html,
"dpd/tstat (go)"_pair_dpd.html,
"dsmc"_pair_dsmc.html,
"e3b"_pair_e3b.html,
"drip"_pair_drip.html,
"eam (gikot)"_pair_eam.html,
"eam/alloy (gikot)"_pair_eam.html,

doc/src/Eqs/e3b.jpg

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doc/src/Eqs/e3b.tex

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\documentclass[12pt]{article}
\usepackage{amsmath}
\begin{document}

\begin{align*}
E =& E_2 \sum_{i,j}e^{-k_2 r_{ij}} + E_A \sum_{\substack{i,j,k,\ell \\\in \textrm{type A}}} f(r_{ij})f(r_{k\ell}) + E_B \sum_{\substack{i,j,k,\ell \\\in \textrm{type B}}} f(r_{ij})f(r_{k\ell}) + E_C \sum_{\substack{i,j,k,\ell \\\in \textrm{type C}}} f(r_{ij})f(r_{k\ell}) \\
f(r) =& e^{-k_3 r}s(r) \\
s(r) =& \begin{cases}
  1 & r<R_s \\
  \displaystyle\frac{(R_f-r)^2(R_f-3R_s+2r)}{(R_f-R_s)^3} & R_s\leq r\leq R_f \\
  0 & r>R_f\\
\end{cases}
\end{align*}

\end{document}
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@@ -56,7 +56,7 @@ COMPASS is a general force field for atomistic simulation of common
organic molecules, inorganic small molecules, and polymers which was
developed using ab initio and empirical parameterization techniques.
See the "Tools"_Tools.html doc page for the msi2lmp tool for creating
LAMMPS template input and data files from BIOVIAs Materials Studio
LAMMPS template input and data files from BIOVIA's Materials Studio
files.  Please note that the msi2lmp tool is very old and largely
unmaintained, so it does not support all features of Materials Studio
provided force field files, especially additions during the last decade.
@@ -129,7 +129,7 @@ Fischer, Gao, Guo, Ha, et al, J Phys Chem, 102, 3586 (1998).
Spellmeyer, Fox, Caldwell, Kollman, JACS 117, 5179-5197 (1995).

:link(howto-Sun)
[(Sun)] Sun, J. Phys. Chem. B, 102, 73387364 (1998).
[(Sun)] Sun, J. Phys. Chem. B, 102, 7338-7364 (1998).

:link(howto-Mayo)
[(Mayo)] Mayo, Olfason, Goddard III, J Phys Chem, 94, 8897-8909
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@@ -29,3 +29,5 @@ diffusion coefficient. The instantaneous VACF values can be
accumulated in a vector via the "fix vector"_fix_vector.html command,
and time integrated via the "variable trap"_variable.html function,
and thus extract D.

:line
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