Commit 52446eed authored by Axel Kohlmeyer's avatar Axel Kohlmeyer
Browse files

make fix bond/react example inputs more similar to other input examples in LAMMPS

parent e8eeb526
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+4 −6
Original line number Diff line number Diff line
@@ -6,8 +6,6 @@ boundary p p p

atom_style full

log testing_log

kspace_style pppm 1.0e-2 # actually, this appears required to check 1-3 neighbors

pair_style lj/class2/coul/long 8.5
@@ -31,7 +29,7 @@ molecule mol4 rxn1_stp2_reacted.data_template

thermo 50

dump 1 all xyz 100 test_vis.xyz
# dump 1 all xyz 100 test_vis.xyz

fix myrxns all bond/react stabilization yes statted_grp .03 &
  react rxn1 all 1 2.9 mol1 mol2 rxn1_stp1_map &
@@ -46,9 +44,9 @@ fix 1 statted_grp nvt temp 800 800 100

thermo_style custom step temp press density f_myrxns[1] f_myrxns[2] # cumulative reaction counts

restart 100 restart1 restart2
# restart 100 restart1 restart2

run 200000

write_restart restart_longrun
write_data restart_longrun.data
# write_restart restart_longrun
# write_data restart_longrun.data
+4 −6
Original line number Diff line number Diff line
@@ -7,8 +7,6 @@ boundary p p p

atom_style full

log testing_log

kspace_style pppm 1.0e-2 # actually, this appears required to make LAMMPS to check 1-3 neighbors

pair_style lj/class2/coul/long 8.5
@@ -32,7 +30,7 @@ molecule mol4 rxn1_stp2_reacted.data_template

thermo 50

dump 1 all xyz 1 test_vis.xyz
# dump 1 all xyz 1 test_vis.xyz

fix myrxns all bond/react stabilization yes statted_grp .03 &
  react rxn1 all 1 2.9 mol1 mol2 rxn1_stp1_map &
@@ -44,9 +42,9 @@ fix 4 bond_react_MASTER_group temp/rescale 1 300 300 10 1

thermo_style custom step temp press density f_myrxns[1] f_myrxns[2]

restart 100 restart1 restart2
# restart 100 restart1 restart2

run 10000

write_restart restart_longrun
write_data restart_longrun.data
# write_restart restart_longrun
# write_data restart_longrun.data