Loading doc/src/Howto_cmake.rst +0 −1 Original line number Diff line number Diff line Loading @@ -208,7 +208,6 @@ You start the command ``ccmake ../cmake`` in the ``build`` folder. Options screen of ``ccmake`` This will show you the initial screen (left image) with the empty configuration cache. Now you type the 'c' key to run the configuration step. That will do a first configuration run and show the summary Loading doc/src/balance.rst +21 −17 Original line number Diff line number Diff line Loading @@ -175,23 +175,27 @@ a logical 3d grid of processors. They operate by changing the cutting planes (or lines) between processors in 3d (or 2d), to adjust the volume (area in 2d) assigned to each processor, as in the following 2d diagram where processor sub-domains are shown and particles are colored by the processor that owns them. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. colored by the processor that owns them. .. image:: JPG/balance_uniform_small.jpg .. list-table:: * - .. figure:: JPG/balance_uniform_small.jpg :target: JPG/balance_uniform.jpg .. image:: JPG/balance_nonuniform_small.jpg - .. figure:: JPG/balance_nonuniform_small.jpg :target: JPG/balance_nonuniform.jpg .. image:: JPG/balance_rcb_small.jpg - .. figure:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The "grid" methods can be used with either of the :doc:`comm_style <comm_style>` command options, *brick* or *tiled*\ . The Loading doc/src/fix_balance.rst +21 −22 Original line number Diff line number Diff line Loading @@ -154,28 +154,27 @@ of processors. It operates by changing the cutting planes (or lines) between processors in 3d (or 2d), to adjust the volume (area in 2d) assigned to each processor, as in the following 2d diagram where processor sub-domains are shown and atoms are colored by the processor that owns them. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. that owns them. .. |bal_uni| image:: JPG/balance_uniform_small.jpg .. list-table:: * - .. figure:: JPG/balance_uniform_small.jpg :target: JPG/balance_uniform.jpg :width: 31% .. |bal_non| image:: JPG/balance_nonuniform_small.jpg - .. figure:: JPG/balance_nonuniform_small.jpg :target: JPG/balance_nonuniform.jpg :width: 31% .. |bal_rcb| image:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg :width: 31% |bal_uni| |bal_non| |bal_rcb| - .. figure:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The "grid" methods can be used with either of the :doc:`comm_style <comm_style>` command options, *brick* or *tiled*\ . The Loading Loading
doc/src/Howto_cmake.rst +0 −1 Original line number Diff line number Diff line Loading @@ -208,7 +208,6 @@ You start the command ``ccmake ../cmake`` in the ``build`` folder. Options screen of ``ccmake`` This will show you the initial screen (left image) with the empty configuration cache. Now you type the 'c' key to run the configuration step. That will do a first configuration run and show the summary Loading
doc/src/balance.rst +21 −17 Original line number Diff line number Diff line Loading @@ -175,23 +175,27 @@ a logical 3d grid of processors. They operate by changing the cutting planes (or lines) between processors in 3d (or 2d), to adjust the volume (area in 2d) assigned to each processor, as in the following 2d diagram where processor sub-domains are shown and particles are colored by the processor that owns them. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. colored by the processor that owns them. .. image:: JPG/balance_uniform_small.jpg .. list-table:: * - .. figure:: JPG/balance_uniform_small.jpg :target: JPG/balance_uniform.jpg .. image:: JPG/balance_nonuniform_small.jpg - .. figure:: JPG/balance_nonuniform_small.jpg :target: JPG/balance_nonuniform.jpg .. image:: JPG/balance_rcb_small.jpg - .. figure:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The "grid" methods can be used with either of the :doc:`comm_style <comm_style>` command options, *brick* or *tiled*\ . The Loading
doc/src/fix_balance.rst +21 −22 Original line number Diff line number Diff line Loading @@ -154,28 +154,27 @@ of processors. It operates by changing the cutting planes (or lines) between processors in 3d (or 2d), to adjust the volume (area in 2d) assigned to each processor, as in the following 2d diagram where processor sub-domains are shown and atoms are colored by the processor that owns them. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. that owns them. .. |bal_uni| image:: JPG/balance_uniform_small.jpg .. list-table:: * - .. figure:: JPG/balance_uniform_small.jpg :target: JPG/balance_uniform.jpg :width: 31% .. |bal_non| image:: JPG/balance_nonuniform_small.jpg - .. figure:: JPG/balance_nonuniform_small.jpg :target: JPG/balance_nonuniform.jpg :width: 31% .. |bal_rcb| image:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg :width: 31% |bal_uni| |bal_non| |bal_rcb| - .. figure:: JPG/balance_rcb_small.jpg :target: JPG/balance_rcb.jpg The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The leftmost diagram is the default partitioning of the simulation box across processors (one sub-box for each of 16 processors); the middle diagram is after a "grid" method has been applied. The *rcb* style is a "tiling" method which does not produce a logical 3d grid of processors. Rather it tiles the simulation domain with rectangular sub-boxes of varying size and shape in an irregular fashion so as to have equal numbers of particles (or weight) in each sub-box, as in the rightmost diagram above. The "grid" methods can be used with either of the :doc:`comm_style <comm_style>` command options, *brick* or *tiled*\ . The Loading
