Loading doc/src/Errors_messages.rst +1 −1 Original line number Diff line number Diff line Loading @@ -301,7 +301,7 @@ Doc page with :doc:`WARNING messages <Errors_warnings>` Specified bond type is not valid. *Bad fix ID in fix append/atoms command* The value of the fix_id for keyword spatial must start with 'f_'. The value of the fix_id for keyword spatial must start with "f\_". *Bad grid of processors* The 3d grid of processors defined by the processors command does not Loading doc/src/compute_chunk_atom.rst +3 −3 Original line number Diff line number Diff line Loading @@ -270,14 +270,14 @@ chunk ID to the atom. *Nchunk* is set to the largest chunk ID. Note that this excludes atoms which are not in the specified group or optional region. If the style begins with "c_", a compute ID must follow which has been If the style begins with "c\_", a compute ID must follow which has been previously defined in the input script. If no bracketed integer is appended, the per-atom vector calculated by the compute is used. If a bracketed integer is appended, the Ith column of the per-atom array calculated by the compute is used. Users can also write code for their own compute styles and :doc:`add them to LAMMPS <Modify>`. If the style begins with "f_", a fix ID must follow which has been If the style begins with "f\_", a fix ID must follow which has been previously defined in the input script. If no bracketed integer is appended, the per-atom vector calculated by the fix is used. If a bracketed integer is appended, the Ith column of the per-atom array Loading @@ -286,7 +286,7 @@ their values on certain timesteps, which must be compatible with the timestep on which this compute accesses the fix, else an error results. Users can also write code for their own fix styles and :doc:`add them to LAMMPS <Modify>`. If a value begins with "v_", a variable name for an *atom* or If a value begins with "v\_", a variable name for an *atom* or *atomfile* style :doc:`variable <variable>` must follow which has been previously defined in the input script. Variables of style *atom* can reference thermodynamic keywords and various per-atom attributes, or Loading doc/src/compute_global_atom.rst +6 −6 Original line number Diff line number Diff line Loading @@ -133,7 +133,7 @@ simple rounded down to convert the value to integer indices. The final values should range from 1 to N (inclusive), since they are used to access values from N-length vectors. If *index* begins with "c_", a compute ID must follow which has been If *index* begins with "c\_", a compute ID must follow which has been previously defined in the input script. The compute must generate per-atom quantities. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the per-atom Loading @@ -144,7 +144,7 @@ styles and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If *index* begins with "f_", a fix ID must follow which has been If *index* begins with "f\_", a fix ID must follow which has been previously defined in the input script. The Fix must generate per-atom quantities. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -157,7 +157,7 @@ own fix style and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If *index* begins with "v_", a variable name must follow which has If *index* begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be an :doc:`atom-style variable <variable>`. Atom-style variables can reference thermodynamic keywords and various per-atom attributes, or Loading @@ -171,7 +171,7 @@ This section explains the kinds of *input* values that can be used. Note that inputs reference global values, as contrasted with the *index* parameter which must reference per-atom values. If a value begins with "c_", a compute ID must follow which has been If a value begins with "c\_", a compute ID must follow which has been previously defined in the input script. The compute must generate a global vector or array. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the vector Loading @@ -181,7 +181,7 @@ used. Users can also write code for their own compute styles and :doc:`add them I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script. The fix must generate a global vector or array. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on Loading @@ -194,7 +194,7 @@ own fix style and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "v_", a variable name must follow which has If a value begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be a :doc:`vector-style variable <variable>`. Vector-style variables can reference thermodynamic keywords and various other attributes of Loading doc/src/compute_reduce.rst +3 −3 Original line number Diff line number Diff line Loading @@ -122,7 +122,7 @@ self-explanatory. Note that other atom attributes can be used as inputs to this fix by using the :doc:`compute property/atom <compute_property_atom>` command and then specifying an input value from that compute. If a value begins with "c_", a compute ID must follow which has been If a value begins with "c\_", a compute ID must follow which has been previously defined in the input script. Computes can generate per-atom or local quantities. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer Loading @@ -133,7 +133,7 @@ compute styles and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script. Fixes can generate per-atom or local quantities. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -145,7 +145,7 @@ is used. Users can also write code for their own fix style and :doc:`add them t be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "v_", a variable name must follow which has If a value begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be an :doc:`atom-style variable <variable>`. Atom-style variables can reference thermodynamic keywords and various per-atom attributes, or Loading doc/src/compute_slice.rst +3 −3 Original line number Diff line number Diff line Loading @@ -55,7 +55,7 @@ vector. Each listed input must be a global vector or column of a global array calculated by another :doc:`compute <compute>` or :doc:`fix <fix>`. If an input value begins with "c_", a compute ID must follow which has If an input value begins with "c\_", a compute ID must follow which has been previously defined in the input script and which generates a global vector or array. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the vector Loading @@ -63,7 +63,7 @@ calculated by the compute is used. If a bracketed integer is appended, the Ith column of the array calculated by the compute is used. Users can also write code for their own compute styles and :doc:`add them to LAMMPS <Modify>`. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script and which generates a global vector or array. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -73,7 +73,7 @@ appended, the vector calculated by the fix is used. If a bracketed integer is appended, the Ith column of the array calculated by the fix is used. Users can also write code for their own fix style and :doc:`add them to LAMMPS <Modify>`. If an input value begins with "v_", a variable name must follow which If an input value begins with "v\_", a variable name must follow which has been previously defined in the input script. Only vector-style variables can be referenced. See the :doc:`variable <variable>` command for details. Note that variables of style *vector* define a formula Loading Loading
doc/src/Errors_messages.rst +1 −1 Original line number Diff line number Diff line Loading @@ -301,7 +301,7 @@ Doc page with :doc:`WARNING messages <Errors_warnings>` Specified bond type is not valid. *Bad fix ID in fix append/atoms command* The value of the fix_id for keyword spatial must start with 'f_'. The value of the fix_id for keyword spatial must start with "f\_". *Bad grid of processors* The 3d grid of processors defined by the processors command does not Loading
doc/src/compute_chunk_atom.rst +3 −3 Original line number Diff line number Diff line Loading @@ -270,14 +270,14 @@ chunk ID to the atom. *Nchunk* is set to the largest chunk ID. Note that this excludes atoms which are not in the specified group or optional region. If the style begins with "c_", a compute ID must follow which has been If the style begins with "c\_", a compute ID must follow which has been previously defined in the input script. If no bracketed integer is appended, the per-atom vector calculated by the compute is used. If a bracketed integer is appended, the Ith column of the per-atom array calculated by the compute is used. Users can also write code for their own compute styles and :doc:`add them to LAMMPS <Modify>`. If the style begins with "f_", a fix ID must follow which has been If the style begins with "f\_", a fix ID must follow which has been previously defined in the input script. If no bracketed integer is appended, the per-atom vector calculated by the fix is used. If a bracketed integer is appended, the Ith column of the per-atom array Loading @@ -286,7 +286,7 @@ their values on certain timesteps, which must be compatible with the timestep on which this compute accesses the fix, else an error results. Users can also write code for their own fix styles and :doc:`add them to LAMMPS <Modify>`. If a value begins with "v_", a variable name for an *atom* or If a value begins with "v\_", a variable name for an *atom* or *atomfile* style :doc:`variable <variable>` must follow which has been previously defined in the input script. Variables of style *atom* can reference thermodynamic keywords and various per-atom attributes, or Loading
doc/src/compute_global_atom.rst +6 −6 Original line number Diff line number Diff line Loading @@ -133,7 +133,7 @@ simple rounded down to convert the value to integer indices. The final values should range from 1 to N (inclusive), since they are used to access values from N-length vectors. If *index* begins with "c_", a compute ID must follow which has been If *index* begins with "c\_", a compute ID must follow which has been previously defined in the input script. The compute must generate per-atom quantities. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the per-atom Loading @@ -144,7 +144,7 @@ styles and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If *index* begins with "f_", a fix ID must follow which has been If *index* begins with "f\_", a fix ID must follow which has been previously defined in the input script. The Fix must generate per-atom quantities. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -157,7 +157,7 @@ own fix style and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If *index* begins with "v_", a variable name must follow which has If *index* begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be an :doc:`atom-style variable <variable>`. Atom-style variables can reference thermodynamic keywords and various per-atom attributes, or Loading @@ -171,7 +171,7 @@ This section explains the kinds of *input* values that can be used. Note that inputs reference global values, as contrasted with the *index* parameter which must reference per-atom values. If a value begins with "c_", a compute ID must follow which has been If a value begins with "c\_", a compute ID must follow which has been previously defined in the input script. The compute must generate a global vector or array. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the vector Loading @@ -181,7 +181,7 @@ used. Users can also write code for their own compute styles and :doc:`add them I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script. The fix must generate a global vector or array. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on Loading @@ -194,7 +194,7 @@ own fix style and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "v_", a variable name must follow which has If a value begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be a :doc:`vector-style variable <variable>`. Vector-style variables can reference thermodynamic keywords and various other attributes of Loading
doc/src/compute_reduce.rst +3 −3 Original line number Diff line number Diff line Loading @@ -122,7 +122,7 @@ self-explanatory. Note that other atom attributes can be used as inputs to this fix by using the :doc:`compute property/atom <compute_property_atom>` command and then specifying an input value from that compute. If a value begins with "c_", a compute ID must follow which has been If a value begins with "c\_", a compute ID must follow which has been previously defined in the input script. Computes can generate per-atom or local quantities. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer Loading @@ -133,7 +133,7 @@ compute styles and :doc:`add them to LAMMPS <Modify>`. See the discussion above for how I can be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script. Fixes can generate per-atom or local quantities. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -145,7 +145,7 @@ is used. Users can also write code for their own fix style and :doc:`add them t be specified with a wildcard asterisk to effectively specify multiple values. If a value begins with "v_", a variable name must follow which has If a value begins with "v\_", a variable name must follow which has been previously defined in the input script. It must be an :doc:`atom-style variable <variable>`. Atom-style variables can reference thermodynamic keywords and various per-atom attributes, or Loading
doc/src/compute_slice.rst +3 −3 Original line number Diff line number Diff line Loading @@ -55,7 +55,7 @@ vector. Each listed input must be a global vector or column of a global array calculated by another :doc:`compute <compute>` or :doc:`fix <fix>`. If an input value begins with "c_", a compute ID must follow which has If an input value begins with "c\_", a compute ID must follow which has been previously defined in the input script and which generates a global vector or array. See the individual :doc:`compute <compute>` doc page for details. If no bracketed integer is appended, the vector Loading @@ -63,7 +63,7 @@ calculated by the compute is used. If a bracketed integer is appended, the Ith column of the array calculated by the compute is used. Users can also write code for their own compute styles and :doc:`add them to LAMMPS <Modify>`. If a value begins with "f_", a fix ID must follow which has been If a value begins with "f\_", a fix ID must follow which has been previously defined in the input script and which generates a global vector or array. See the individual :doc:`fix <fix>` doc page for details. Note that some fixes only produce their values on certain Loading @@ -73,7 +73,7 @@ appended, the vector calculated by the fix is used. If a bracketed integer is appended, the Ith column of the array calculated by the fix is used. Users can also write code for their own fix style and :doc:`add them to LAMMPS <Modify>`. If an input value begins with "v_", a variable name must follow which If an input value begins with "v\_", a variable name must follow which has been previously defined in the input script. Only vector-style variables can be referenced. See the :doc:`variable <variable>` command for details. Note that variables of style *vector* define a formula Loading
