"Added documentation to the TarantulaMain program"

import java.io.File;

import java.util.ArrayList;

/**************************************************************************

 * Main for tarantula calculation, takes 2 command line arguments

 * arg[1] - compact-cov-matrix.json file

 * arg[2] - package.name of test program

 * examples of the args are in comments next to the args indexes below 

 **************************************************************************/

public class TarantulaMain {

	    public static void main(String[] args) throws ClassNotFoundException {

	        // create the Matrix Reader to get Test -- Stmt information

	        File f = new File(args[0]/*"/homes/iws/kevinb22/Downloads/triangle-mvn-compact-cov-matrix.json"*/);

	        covMatrixReader reader = new covMatrixReader(f);

	        File f = new File(args[0]); // "/abs/path/to/triangle-mvn-compact-cov-matrix.json"*

		 reader = new covMatrixReader(f);

	        Long testCountLong = reader.getTestCount();

	        String testCountString = testCountLong.toString();

	        int testCountInt = Integer.parseInt(testCountString);

	        // create Runner class to get the failing cases from JUnit tests

	        Class testClass = Class.forName(args[1]/*"TarantulaCalculator.TriangleTest"*/);

	        Class testClass = Class.forName(args[1]); //"TarantulaCalculator.TriangleTest"

	        Runner r = new Runner(testClass);

	        r.determineFailCases();

	        ArrayList<Integer> fails = r.getFailCases();

	        System.out.println("------------------------------------------------------------------");

	        displaySusp(calc.getSuspiciousness(), reader.getFirstLine());

	    }

	    // display the confidence array for the program	     

	    public static void displayConf(double[] a, Long firstLine){

	        System.out.println("Confidence Array");

	        for(int i = 0; i < a.length; i++) {

	        }

	    }

	    // dispaly the susp. array for the program

	    public static void displaySusp(double[] a, Long firstLine){

	        System.out.println("Suspicion Array");

	        for(int i = 0; i < a.length; i++) {