课程大纲
COURSE SYLLABUS
1.
课程代码/名称
Course Code/Title
类器官与生物医学研究
Organoids in Biomedical Research
2.
课程性质
Compulsory/Elective
选修
3.
开课单位
Offering Dept.
医学院 药理学系
4.
课程学分/学时
Course Credit/Hours
3/48
5.
授课语言
Teaching Language
英文
6.
授课教师
Instructor(s)
李亮
7.
开课学期
Semester
秋季
8.
是否面向本科生开放
Open to undergraduates
or not
9.
先修要求
Pre-requisites
(如面向本科生开放,请注明区分内容。
If the course is open to
undergraduates, please indicate the difference.
10.
教学目标
Course Objectives
(如面向本科生开放,请注明区分内容。 If the course is ope
n to undergraduates, please indicate the
difference.
本课程将介绍类器官等新型模型的基本特性、构建方法、应用原则,及其在生物医药科研与药物研发中的应用案例解
读。类器官等新型生物医药模型在新冠疫情以来备受瞩目,也在近年来的生物医药研发中进展日新月异,起到越来越
不可忽视的作用。对于这一前沿方向,本课程将提供基本的知识与应用、评价原则介绍,结合实际案例让医学、生命
科学、药学、生物医学工程等学科的学生了解相关基础知识和学科发展。同时,生物医药研发中类器官等模型的应用
是一个关键要素,本课程可为学生的未来科研、工业界职业发展提供良好的助力,也为研究生的科研项目提供新的工
具和研究对象,加深学生对于生理学、病理学、药学等学科的深入理解。
11.
教学方法
Teaching Methods
(如面向本科生开放,请注明区分内容。
If the course is open to undergraduates, please indicate the
difference.
本课程以课堂教学为主来介绍学科基本知识解读,同时提供实际应用场景探讨以让学生对相关模型的应用前景具备认
知。课程也将针对学科的前沿发展提出相关问题,让学生进行以问题为中心的文献挖掘与小论文总结,从而在应用本
课程所涉基本理论解决问题的过程中加深其对课程内容的理解。
12.
教学内容
Course Contents
(如面向本科生开放,请注明区分内容。 If the course is open to undergraduates, please indicate the
difference.
Section 1
Introduction: Cells, Animals, Clinical Samples, and Mini-Organs
Overview of the commonly used and novel models in biomedical
research and therapy development
Introduce the individual characteristics of the different categories of
biomedical models
Introduce the specific application scenarios of each type of the models
Compare the pros and cons of each category of the biomedical models
Organoids as a rising star in biomedical models
In-cl
ass discussion: When we talk about research models, what are the
main aspects to consider?
Section 2
Basic Principles of Organoids Construction
Overview of organoids: definition, history, and applications
Introduction to stem cell biology related to organoids construction
How to construct organoids, and what they can be used for – an overview
Common problems encountered in organoids construction
In-
class discussion: What is the difference between organoids and other
biomedical research models? What are the unique characteristics of
organoids, which cannot be replaced by other models?
Section 3
Development of organoids technology and the theory behind
Why organoids were developed for biomedical research
Early-stage research on organoids development
Organoids and developmental biology
Main stages of the progress of organoids technology
Importance of organoids during COVID-
19 pandemic for biomedical
research and therapy development
In-
class discussion: How developmental biology promoted the technical
advance of organoids construction? What may be the future promoting
factors for organoids technology?
Section 4
Gut Organoids: Stomach, Intestine, and Colon
A
natomy and physiology of the major sections of the gut: stomach,
intestine, and colon
How to construct gut organoids, and what have been achieved so far
Key mechanisms involved in gut organoids differentiation
A
pplication of gut organoids in biomedical research, with a focus on the
recent COVID-19 research
Gut organoids and gut microbiota
In-
class discussion: What key features must be there for successful gut
organoids? What are the requirements for the experimental set-
up to
mimic a real gut micro-environment?
Section 5
Respiratory Organoids: Upper Airway and Lower Airway
A
natomy and physiology of the major sections of the respiratory system:
upper airway and lower airway
How to construct respiratory orga
noids, and what have been achieved so
far
Key mechanisms involved in respiratory organoids differentiation
Commonly used experimental set-up for respiratory organoids
A
pplication of respiratory organoids in biomedical research, with a focus
on the recent COVID-19 research
In-
class discussion: Similarity and difference between gut and respiratory
organoids, from main features to culture conditions.
Section 6
Brain Organoids and Blood Vessel Organoids
Difficulties encountered in the development of brain or
ganoids:
technological and ethical
Key mechanisms involved in brain organoids construction
Application of brain organoids in biomedical research
Difficulties encountered in the development of blood vessel organoids
Key mechanisms involved in blood vessel organoids construction
Application of blood vessel organoids in biomedical research
In-class discussion: Influence of cell sources on organoids construction
Section 7
Introduction to the Research Literature of Organoids
Summary of a selected literature po
ol of organoids development and
research applications
How to read the literature – experience with organoids literature
Class discussion on the organoids literature and topic selection for
individual literature analysis report of the students
Section 8
Liver Organoids and Kidney Organoids
Anatomy and physiology of liver and kidney
Key mechanisms involved in liver organoids construction
Progress of liver organoids development using different methods
Key mechanisms involved in kidney organoids construction
A
pplication of liver and kidney organoids in biomedical research, with a
focus on the recent COVID-19 research
In-
class discussion: What is a good representation of the target organs
when the organ itself is complicated?
Section 9
Tumour Organoids
Intr
oduction of the various categories of tumour organoids in research
and biomedical industry
Application of tumour organoids in cancer research and treatment
Tumour organoids and precision medicine
2-D, 3-D, spherical and other shapes: how would the geometry
affect the
application of the organoids?
Drug sensitivity assays using tumour organoids for precision medicine
In-
class discussion: What aspects of tumour biology can benefit from
organoids technology?
Section 10
Application of Organoids in Drug Development
Introduction to the pipeline of drug development
Organoids as a drug screening platform
Organoids and Phase I clinical trial
Organoids and Phase II clinical trial
Organoids and precision medicine
Limitations of current technologies in organoids construction and
application
Class discussion and project assignment: application of organoids in
postgraduate biomedical research project
Section 11
Organoids on a Chip and Others Innovations with Engineering
Why engineering innovations are needed for organoids development
Tissue, immune cells, and microbiota, the missing links in organoids
construction
Tissue engineering and organoids construction
Microfluid chips, 3-D printing, and hydrogels for organoids construction
Organoids on a chip
Combining organoids of different sources and with other models
Section 12
Application of Organoids in a Biomedical Research Project
Application of organoids in a research project – when, what, and how
Typical scenarios of organoids application in a biomedical research
project
Basic requirements of organoids platform set-up in a biomedical lab
Experience with organoids application in biomedical research projects
Brain storm of organoids application in a biomedical lab scenario
In-class discussion on the essay writing plans
Section 13
Organoids and Other Models Part I
Comparison of organoids and primary cells
Comparison of organoids and clinical samples
Application of organoids and cell-based models in biomedical research
and drug development
Combining organoids with primary cells
Organ-on-a-chip and Lab-on-a-chip: the future?
In-class discussion: The next generation of cell culture
Section 14
Organoids and Other Models Part II
Comparison of organoids and animal models
Introduction of animal models for various research areas
Organoids vs. humanized mouse model: different application scenarios
Tumour organoids and patient-derived xenograft animal models
Combining organoids with animal models
In-class discussion: From organoids culture to organ transplant what
are the remaining steps
Section 15
Organoids and Other Models Part III
Introduction of other biomedical models
Comparison of organoids with other biomedical models
Combing the strengths of organoids with other biomedical models
Organoids for animals
Innovations for organoids: science and engineering
In-class discussion: how shall we construct a “perfect” biomedical
model by combing organoids and other biomedical models
Section 16
Summary of the course, future directions of organoids technology,
and feedback
Course summary: concepts, classifications, and main theory
Course summary: criteria of successful organoids for different types
of organs
Course summary: applications of organoids in biomedical research
and drug development
Course summary: limitations in current organoids development
Discuss on the future directions of organoids technology
Feedback on the course content
13.
课程考核
Course Assessment
1 考核形式 Form of examination
2 .分数构成 grading policy
3 如面向本科生开放,请注明区分内容。
If the course is open to undergraduates, please indicate the difference.
考核形式:考查
分数构成:课堂表现 10%,小论文 30%,文献分析报告 30%,课堂测 30%(共一次)。
14.
教材及其它参考资料
Textbook and Supplementary Readings
Organoids and Mini-Organs, ed.1 by Jamie Davies; Melanie Lawrence
; ISBN: 9780128126363;
Academic Press, 2018
Organoids: Stem Cells, Structure, and Function, ed.1 by Kursad Turksen; ISBN: 9781493
976171;
Humana Press, 2019