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| Oncotree-package | Constructing and evaluating oncogenetic trees |
| ancestors | Find ancestors within an oncogenetic tree. |
| bootstrap.oncotree | Bootstrap an oncogenetic tree to assess stability |
| distribution.oncotree | Find the event distribution defined by an oncogenetic tree |
| error.rates<- | Set the error rates of an oncotree manually |
| generate.data | Generate random data from an oncogenetic tree |
| least.common.ancestor | Find ancestors within an oncogenetic tree. |
| marginal.distr | Find the event distribution defined by an oncogenetic tree |
| Oncotree | Constructing and evaluating oncogenetic trees |
| oncotree.fit | Build and display an oncogenetic tree |
| ov.cgh | Ovarian cancer CGH data |
| plot.boottree | Bootstrap an oncogenetic tree to assess stability |
| plot.oncotree | Build and display an oncogenetic tree |
| print.boottree | Bootstrap an oncogenetic tree to assess stability |
| print.oncotree | Build and display an oncogenetic tree |
| pstree.oncotree | Build and display an oncogenetic tree |