qukg_calculation {cobiclust}R Documentation

Calculate E_q(U_ijr) and E_q(log U_ijr) when U_ijr follows a Gamma(a_k,g,a_k,g)

Description

Calculate E_q(U_ijr) and E_q(log U_ijr) when U_ijr follows a Gamma(a_k,g,a_k,g)

Usage

qukg_calculation(s_ik = s_ik, t_jg = t_jg, x = x, mu_i = mu_i,
  nu_j = nu_j, alpha_c = alpha_c, a = a)

Arguments

s_ik

s_ik.

t_jg

t_jg.

x

a matrix of observations. Columns correspond to biological samples and rows to microorganisms.

mu_i

mu_i.

nu_j

nu_j.

alpha_c

alpha_c.

a

a0.

Value

A list of 4 elements.

a_tilde

a_tilde.

b_tilde

b_tilde.

exp_utilde

exp_utilde.

exp_logutilde

exp_logutilde.


[Package cobiclust version 0.1.0 Index]