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| PCIT-package | Partial Correlation coefficient with Information Theory (PCIT) |
| clusteringCoefficient | Calculate the clustering coefficient |
| clusteringCoefficientPercent | Calculate the clustering coefficient as a percentage |
| data | Demo Data |
| defineTasks | Define a list of tasks for slave CPUs |
| getEdgeList | Converts an adjacency matrix into edge list representation |
| idx | Get indicies for significant edges |
| idxInvert | Invert linear indices from a matrix |
| localClusteringCoefficient | Calculate the local clustering coefficient |
| m | Demo Data |
| maxMatrixSize | Calculate the maximum correlation matrix size which PCIT can handle |
| PCIT | Partial Correlation coefficient with Information Theory (PCIT) |
| pcit | Apply the PCIT algorithm |
| pcitMemoryRequirement | Calculate the memory requirement for running PCIT |
| plotCorCoeff | Plot superimposed histograms of correlation coefficients |