OpenMM
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This is the complete list of members for Topology, including all inherited members.
__init__(self) | Topology | |
__repr__(self) | Topology | |
addAtom | Topology | |
addBond(self, atom1, atom2) | Topology | |
addChain | Topology | |
addResidue | Topology | |
atoms(self) | Topology | |
bonds(self) | Topology | |
chains(self) | Topology | |
createDisulfideBonds(self, positions) | Topology | |
createStandardBonds(self) | Topology | |
getPeriodicBoxVectors(self) | Topology | |
getUnitCellDimensions(self) | Topology | |
loadBondDefinitions(file) | Topology | static |
residues(self) | Topology | |
setPeriodicBoxVectors(self, vectors) | Topology | |
setUnitCellDimensions(self, dimensions) | Topology |