{% if menu %}
{% include "chlamdb/menu.html" %}
{% endif %}
{% if not valid_id %}
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{% if sequence_type == "CDS" %}
{% endif %}
{%if ko_pathway_data or ko_module_data %}
{%if ko_pathway_data %}
{% for pathway in ko_pathway_data %}
{% endif %}
{% if cog_entries|length > 0 %}
{% endif %}
{% if pfam_def|length > 0 %}
{% for val in pfam_def %}
{% endif %}
{% if ko_entries|length > 0 %}
{% endif %}
{% endif %}
{% else %}
{% include "chlamdb/homologs.html" %}
Distribution of the homologs in the orthogroup {{og_id|safe}}
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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).
Phylogeny of the RefSeq best hits of {{og_id|safe}}
{{entry}} | {% endfor %}|
---|---|
{{entry|safe}} | {% else %}{{entry|safe}} | {% endif %} {% endfor %}
- Number of RefSeq hits: {{n_refseq_homologs}}
{{entry}} | {% endfor %}
---|
{{entry|safe}} | {% endfor %}
General
Source | {{organism}} | |
---|---|---|
Locus tag | {{locus_tag}} | |
Feature type | {{feature_type}} | Gene | {{gene}} |
Product | {{prot}} | |
Location | {{start}} - {{end}} (strand: {{strand}}) | |
Length | {% if sequence_type == "CDS" %}{{nucl_length}} (nucleotides) / {{length}} (amino acids) | {% else %}{{nucl_length}} (nucleotides) | {% endif %}
Genomic region
Pathway | {{pathway.1}} | {{pathway.2}} | {{pathway.3}} |
Module | {{module.0}} | {{module.1}} | {{module.2}} |
COG annotation(s)
{{h|safe}} | {% endfor %}
---|
{{ entry|safe }} | {% endfor %}
Domains
{{val.0|safe}} | {{val.1}} |
---|
Kegg Ortholog annotation(s)
{{entry|safe}} | {% endfor %}
---|
{{e|safe}} | {% endfor %}
{% if sequence_type == "CDS" %}
{% endif %}
Protein Sequence
{{translation}}
Flanking regions ( +/- flanking 50bp)
{{ seq|safe }}