{% include "chlamdb/menu.html" %}
Help
Create circos plots indicating the presence(red scale)/absence(light blue) of homologous proteins in one or multiple other genomes. Click on the circos plot to open a new windows with clickable version of the plot.
rRNA are colored in blue, tRNA in red.
Locus annotation
Locus | start | end | C | KO | Pathways | Modules | Interpro | Gene | nH | nG | TM | SP | Product | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAP | {{data.2}} | {{data.3}} | |||||||||||||||||
{{data.1}} | {{data.2}} | {{data.3}} | {{data.5}} | ||||||||||||||||
{{data.1}} | {{data.2}} | {{data.3}} | {{data.5}} | ||||||||||||||||
{{values.2}} | {{data.2}} | {{data.3}} | {% with locus_tag2cog_name|keyvalue:values.2 as name %} {% if name == '-' %}{{locus_tag2cog_name|keyvalue:values.2}} | {% else %}{{locus_tag2cog_catego|keyvalue:values.2}} | {% endif %} {%endwith%} {% with locus_tag2ko|keyvalue:values.2 as oneko %} {% if oneko == '-' %}{{locus_tag2ko|keyvalue:values.2}} | - | - | {% else %}{{locus_tag2ko|keyvalue:values.2}} | {% with ko2ko_pathways|keyvalue:oneko as name %} {% if name == '-' %}- | {% else %}{{name|safe}} | {% endif %} {%endwith%} {% with ko2ko_modules|keyvalue:oneko as name %} {% if name == '-' %}- | {% else %}{{name|safe}} | {% endif %} {%endwith%} {% endif %} {%endwith%} {% with locus2interpro|keyvalue:values.2 as interpro_data %}{% for one_interpro in interpro_data %} {% if one_interpro.0 != '-' %} {{one_interpro.0}} / {%else%} {{one_interpro.0}} {%endif%} {{one_interpro.1}} {% endfor %} {%endwith%} | {{values.7}} | {{values.8}} | {{values.9}} | {{values.10}} | {{values.11}} | {{values.12}} |