Pipette Biological Data In and Out of R

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Documentation for package ‘pipette’ version 0.4.6

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as.data.frame Coerce to data frame
as.data.frame-method Coerce to data frame
as.data.table Coerce to data table
as.data.table.DataFrame Coerce to data table
as.data.table.GenomicRanges Coerce to data table
as.data.table.IRanges Coerce to data table
as.DataFrame Coerce to data frame
as.DataFrame-method Coerce to data frame
as.SummarizedExperiment Coerce to summarized experiment
as.SummarizedExperiment-method Coerce to summarized experiment
assignAndSaveData Assign and save data
as_tibble Coerce to tibble
as_tibble.DataFrame Coerce to tibble
as_tibble.GenomicRanges Coerce to tibble
as_tibble.IRanges Coerce to tibble
atomize Atomize
atomize-method Atomize
coerce-data.frame Coerce to data frame
coerce-data.table Coerce to data table
coerce-DataFrame Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data table
coerce-method Coerce to tibble
coerce-SummarizedExperiment Coerce to summarized experiment
coerce-tbl_df Coerce to tibble
coerceToList Coerce to list
coerceToList-method Coerce to list
decode Decode column data that uses run-length encoding
decode-method Decode column data that uses run-length encoding
droplevels Drop unused levels from factors
droplevels-method Drop unused levels from factors
encode Encode using run-length encoding
encode-method Encode using run-length encoding
export Export
export-method Export
factorize Factorize
factorize-method Factorize
import Import
loadData Load data
loadDataAsName Load data as name
loadRemoteData Load remote data
localOrRemoteFile Dynamically handle a local or remote file path
matchRowNameColumn Match row name column
matchRowNameColumn-method Match row name column
metadata2 Metadata
metadata2-method Metadata
metadata2<- Metadata
metadata2<--method Metadata
naStrings NA strings
removeNA Remove rows and columns containing only NA values
removeNA-method Remove rows and columns containing only NA values
sanitizeNA Sanitize NA values
sanitizeNA-method Sanitize NA values
sanitizePercent Sanitize percentage
sanitizePercent-method Sanitize percentage
saveData Save data