Assignments LCA cutoff: LCA minimum abundance cutoff:
Rank: Taxonomic rank: Abundance:
Sample ID
Barcode
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Pipeline
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Engine version
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Reads

Basecalled reads

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Database

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Classified reads

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Unclassified reads

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Basecalled yield

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Classified yield

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These reads are being analysed...

Plots will appear after the first chunk of reads has been analysed.

Donut
Tree
Treemap
Taxa accumulation - All levels

Data Not Available

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AMR Table
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Putative Host Taxa Analysis

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Accumulation

Taxa accumulation plot.

AMR Table

Antimicrobial resistance analysis table.

Putative Host Analysis

Donut plot of taxa identified via AMR walkout analysis.

AMR Hits

Donut plot of AMR hits.