org.irisa.genouest.logol.utils
Class FastaConverter.SingleRichSeqIterator
java.lang.Object
org.irisa.genouest.logol.utils.FastaConverter.SingleRichSeqIterator
- All Implemented Interfaces:
- org.biojava.bio.seq.SequenceIterator, org.biojavax.bio.BioEntryIterator, org.biojavax.bio.seq.RichSequenceIterator
- Enclosing class:
- FastaConverter
public static final class FastaConverter.SingleRichSeqIterator
- extends java.lang.Object
- implements org.biojavax.bio.seq.RichSequenceIterator
Used to iterate over a single rich sequence
Field Summary |
private org.biojavax.bio.seq.RichSequence |
seq
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
seq
private org.biojavax.bio.seq.RichSequence seq
FastaConverter.SingleRichSeqIterator
public FastaConverter.SingleRichSeqIterator(org.biojava.bio.seq.Sequence seq)
- Creates an iterator over a single sequence.
- Parameters:
seq
- the sequence to iterate over.
hasNext
public boolean hasNext()
-
- Specified by:
hasNext
in interface org.biojava.bio.seq.SequenceIterator
- Specified by:
hasNext
in interface org.biojavax.bio.BioEntryIterator
- Returns:
- true if another
RichSequence
is available
nextSequence
public org.biojava.bio.seq.Sequence nextSequence()
-
- Specified by:
nextSequence
in interface org.biojava.bio.seq.SequenceIterator
- Returns:
- a
RichSequence
nextBioEntry
public org.biojavax.bio.BioEntry nextBioEntry()
-
- Specified by:
nextBioEntry
in interface org.biojavax.bio.BioEntryIterator
- Returns:
- a
RichSequence
nextRichSequence
public org.biojavax.bio.seq.RichSequence nextRichSequence()
-
- Specified by:
nextRichSequence
in interface org.biojavax.bio.seq.RichSequenceIterator
- Returns:
- a
RichSequence