Bayesian ANalysis Of Compositional Covariance


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Documentation for package ‘banocc’ version 1.4.0

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banocc-package banocc: A package for Bayesian ANalysis of Compositional Correlation
banocc banocc: A package for Bayesian ANalysis of Compositional Correlation
banocc_model The stan model used in the Bayesian fit
compositions_hard_null Simulated compositional data with no feature correlations
compositions_neg_spike Simulated compositional data with a negative count correlation
compositions_null Simulated compositional data with no feature correlations
compositions_pos_spike Simulated compositional data with a positive count correlation
counts_hard_null Simulated count data with no feature correlations
counts_neg_spike Simulated count data with one negative feature correlation
counts_null Simulated count data with no feature correlations
counts_pos_spike Simulated count data with one positive feature correlation
get_banocc_output Takes a model fit from BAnOCC, evaluates convergence and generates appropriate convergence metrics and inference
run_banocc Runs BAnOCC to fit the model and generate appropriate convergence metrics and inference.