Last updated on 2025-01-09 01:49:45 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1-20 | ERROR | ||||
| r-devel-linux-x86_64-debian-gcc | 1.1-20 | 2.41 | 127.77 | 130.18 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1-20 | 263.85 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1-20 | 281.09 | OK | |||
| r-devel-windows-x86_64 | 1.1-20 | 4.00 | 94.00 | 98.00 | OK | --no-vignettes |
| r-patched-linux-x86_64 | 1.1-20 | 4.52 | 152.84 | 157.36 | OK | |
| r-release-linux-x86_64 | 1.1-20 | 3.27 | 154.16 | 157.43 | OK | |
| r-release-macos-arm64 | 1.1-20 | 117.00 | OK | |||
| r-release-macos-x86_64 | 1.1-20 | 232.00 | OK | |||
| r-release-windows-x86_64 | 1.1-20 | 5.00 | 84.00 | 89.00 | OK | --no-vignettes |
| r-oldrel-macos-arm64 | 1.1-20 | 195.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1-20 | 412.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1-20 | 5.00 | 78.00 | 83.00 | OK | --no-vignettes |
Version: 1.1-20
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Ch_analysing_longitudinal_dataI.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: mvtnorm
Loading required package: survival
Loading required package: TH.data
Loading required package: MASS
Attaching package: 'TH.data'
The following object is masked from 'package:MASS':
geyser
--- finished re-building 'Ch_analysing_longitudinal_dataI.Rnw'
--- re-building ‘Ch_analysing_longitudinal_dataII.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Beginning Cgee S-function, @(#) geeformula.q 4.13 98/01/27
running glm to get initial regression estimate
Loading required package: Matrix
Warning in checkConv(attr(opt, "derivs"), opt$par, ctrl = control$checkConv, :
Model failed to converge with max|grad| = 0.197379 (tol = 0.002, component 1)
--- finished re-building 'Ch_analysing_longitudinal_dataII.Rnw'
--- re-building ‘Ch_analysis_of_variance.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: RColorBrewer
--- finished re-building 'Ch_analysis_of_variance.Rnw'
--- re-building ‘Ch_cluster_analysis.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Package 'mclust' version 6.1.1
Type 'citation("mclust")' for citing this R package in publications.
Attaching package: 'mvtnorm'
The following object is masked from 'package:mclust':
dmvnorm
--- finished re-building 'Ch_cluster_analysis.Rnw'
Note: skipping ‘Ch_conditional_inference.Rnw’ due to unavailable dependencies:
'coin'
--- re-building ‘Ch_density_estimation.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
KernSmooth 2.23 loaded
Copyright M. P. Wand 1997-2009
Loading required package: lattice
Attaching package: 'boot'
The following object is masked from 'package:flexmix':
boot
The following object is masked from 'package:lattice':
melanoma
Package 'mclust' version 6.1.1
Type 'citation("mclust")' for citing this R package in publications.
Warning in sub(object$syntax$docexpr, val, chunk[pos[1L]]) :
argument 'replacement' has length > 1 and only the first element will be used
--- finished re-building 'Ch_density_estimation.Rnw'
--- re-building ‘Ch_errata.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
--- finished re-building 'Ch_errata.Rnw'
--- re-building ‘Ch_gam.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: nlme
This is mgcv 1.9-1. For overview type 'help("mgcv-package")'.
Loading required package: parallel
Loading required package: stabs
Loading required package: RColorBrewer
--- finished re-building 'Ch_gam.Rnw'
--- re-building ‘Ch_graphical_display.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
--- finished re-building 'Ch_graphical_display.Rnw'
--- re-building ‘Ch_introduction_to_R.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Error in quantile.default(x, prob = c(0.25, 0.75), names = FALSE) :
missing values and NaN's not allowed if 'na.rm' is FALSE
--- finished re-building 'Ch_introduction_to_R.Rnw'
--- re-building ‘Ch_logistic_regression_glm.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Waiting for profiling to be done...
Waiting for profiling to be done...
Waiting for profiling to be done...
Waiting for profiling to be done...
--- finished re-building 'Ch_logistic_regression_glm.Rnw'
--- re-building ‘Ch_meta_analysis.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
--- finished re-building 'Ch_meta_analysis.Rnw'
--- re-building ‘Ch_multidimensional_scaling.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: RColorBrewer
Warning in cmdscale(watervoles, k = 13, eig = TRUE) :
only 7 of the first 13 eigenvalues are > 0
--- finished re-building 'Ch_multidimensional_scaling.Rnw'
--- re-building ‘Ch_multiple_linear_regression.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: RColorBrewer
--- finished re-building 'Ch_multiple_linear_regression.Rnw'
--- re-building ‘Ch_principal_components_analysis.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
--- finished re-building 'Ch_principal_components_analysis.Rnw'
Note: skipping ‘Ch_recursive_partitioning.Rnw’ due to unavailable dependencies:
'party'
--- re-building ‘Ch_simple_inference.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: grid
Warning in wilcox.test.default(mooringdiff) :
cannot compute exact p-value with ties
Warning in wilcox.test.default(mooringdiff) :
cannot compute exact p-value with ties
--- finished re-building 'Ch_simple_inference.Rnw'
--- re-building ‘Ch_simultaneous_inference.Rnw’ using Sweave
Loading required package: HSAUR2
Loading required package: tools
Loading required package: mvtnorm
Loading required package: survival
Loading required package: TH.data
Loading required package: MASS
Attaching package: 'TH.data'
The following object is masked from 'package:MASS':
geyser
Error: processing vignette 'Ch_simultaneous_inference.Rnw' failed with diagnostics:
chunk 3 (label = SIMC-setup)
Error in library("coin") : there is no package called 'coin'
--- failed re-building 'Ch_simultaneous_inference.Rnw'
Note: skipping ‘Ch_survival_analysis.Rnw’ due to unavailable dependencies:
'coin'
SUMMARY: processing the following file failed:
‘Ch_simultaneous_inference.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang